KEGG   Zea mays (maize): 100282349
Entry
100282349         CDS       T01088                                 
Name
(RefSeq) LSM7-like
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100282349
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100282349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100282349
   03041 Spliceosome [BR:zma03041]
    100282349
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100282349
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100282349
Spliceosome [BR:zma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100282349
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 100282349
NCBI-ProteinID: NP_001148733
UniProt: B6T6E9
LinkDB
Position
10:complement(146451045..146457925)
AA seq 156 aa
MYGQGPALFLGEFFPLPPLRPCRAAAAASTVRAKIRSSLSAIFGRRRQQDLREGFRVEMA
GRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENEREQDDPLKLSG
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLADGA
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtacggacaaggacctgctctgtttctcggcgagtttttcccacttccacctctccgt
ccctgccgagctgcggcggccgcatcgactgttagggcgaaaatccgttctagtctctcg
gcgattttcggcaggcggaggcagcaggatctgcgggaaggatttcgtgtcgagatggct
gggcgcaaggaaactgcactcgacctggcgaagttcgtcgacaagggcgtccaggtgaag
ctcaccggcggccgccaagtgacaggaactctaaagggatatgaccaactactcaactta
gtgctagatgaagcagttgagaatgaaagagagcaagatgatccattgaagctatcaggg
aaaactagacaacttggcctcattgtgtgcagaggcacggcagtcatgctggtctcaccg
actgatgggactgatgagatcgccaaccctttcctcgcggacggagcatag

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