Entry
Name
KO
K12626 U6 snRNA-associated Sm-like protein LSm7
Organism
Pathway
Brite
KEGG Orthology (KO) [BR:zma00001 ]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100282349
09123 Folding, sorting and degradation
03018 RNA degradation
100282349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:zma03019 ]
100282349
03041 Spliceosome [BR:zma03041 ]
100282349
Messenger RNA biogenesis [BR:zma03019 ]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100282349
mRNA degradation factors
5'-3' decay
Lsm complex
100282349
Spliceosome [BR:zma03041 ]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100282349
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
10:complement(146451045..146457925)
Genome browser
AA seq
156 aa AA seq DB search
MYGQGPALFLGEFFPLPPLRPCRAAAAASTVRAKIRSSLSAIFGRRRQQDLREGFRVEMA
GRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENEREQDDPLKLSG
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLADGA
NT seq
471 nt NT seq +upstream nt +downstream nt
atgtacggacaaggacctgctctgtttctcggcgagtttttcccacttccacctctccgt
ccctgccgagctgcggcggccgcatcgactgttagggcgaaaatccgttctagtctctcg
gcgattttcggcaggcggaggcagcaggatctgcgggaaggatttcgtgtcgagatggct
gggcgcaaggaaactgcactcgacctggcgaagttcgtcgacaagggcgtccaggtgaag
ctcaccggcggccgccaagtgacaggaactctaaagggatatgaccaactactcaactta
gtgctagatgaagcagttgagaatgaaagagagcaagatgatccattgaagctatcaggg
aaaactagacaacttggcctcattgtgtgcagaggcacggcagtcatgctggtctcaccg
actgatgggactgatgagatcgccaaccctttcctcgcggacggagcatag