Zea mays (maize): 100282440
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Entry
100282440 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100282440
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
zma
Zea mays (maize)
Pathway
zma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100282440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100282440
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100282440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
DUF7283
zf-RING_13
DUF1258
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
100282440
NCBI-ProteinID:
NP_001148823
UniProt:
B6T7E5
LinkDB
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Position
5:41566407..41591073
Genome browser
AA seq
531 aa
AA seq
DB search
MGSADLVLKMACEGCGNTSDLYGTGCKHTTLCSDCGKSMARSRARCLVCSAPITRLIREY
NVRANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQIAENMREKYNKKPWI
LEDETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWFNFSKIAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKESARPKKGKNNEEGNNS
DKGEEDEEEEATRKNRLGLTKKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNESDADEDE
EDEDQEDDSSPVLAPKQKDQVKDEPVDSSPSKPAPSGHARGTPPASKSKQKRKSGVDDAK
TSSGAASKKAKVELDAKASGLKEEASSLAKPASKTSAASKSGTSVSPVTEDEIRSVLLAV
APVTTQDLVSRFKSRLRGAEDKNAFAEILKKISKIQKTNGHNYVVLRDDKK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcggacctggtgctcaagatggcttgcgagggctgcggcaacacgtcggat
ctctacggcacggggtgcaagcacaccactctctgcagtgactgcgggaagtccatggca
cgctcccgtgcccgctgcctcgtctgctccgcgcccatcaccaggctcatccgggaatat
aatgtacgagctaattctgttatggataagacatactctattggacgatttgtcactggt
ttacctcctttctcgaaaaagaagaatgccgagaacaagtggtctctccataaggagggt
ctgcaaggccgtcagatagccgagaatatgcgggaaaaatacaacaagaaaccatggatt
ttggaagacgaaacaggccaatatcagtatcaaggtcaaatggaaggatcacagtcagct
acagctacatattatttgttaatgaggcacggcaaggaatttaatgcatatcctgctggc
tcttggtttaatttcagtaaaattgcacagtacaaacaattgacactggaggaggctgaa
gaaaagatgaataagaggaagaccagtgcaactggttatgaacgctggatgatgaaagca
gcggcaaatggaccagctgcctttggttcagacatgaagaagcttgaggccacaaatggt
ggggaaaaagaaagtgctcgtcctaagaaaggaaaaaataatgaagagggtaataattct
gataagggtgaggaggatgaagaagaggaagcaacacgcaagaatagacttggactaact
aaaaagggcatggatgatgatgaggaaggtggaaaagatctagatttcgatttggatgat
gaaattgagaaaggtgatgactgggagcatgaagaaacattcactgacgatgatgaggct
gtagacattgatccagaggaacgggcagatttagctcctgaaattcctgctccacctgaa
atcaagcaggatgatgaagagaacgaagaagaagggggcctgagcaagtctggcaaggaa
ctaaaaaagttgcttgggcgcgccgctggactaaatgagtcagatgcggatgaggatgaa
gaagacgaagatcaagaagatgattcatcgccagtgcttgctccaaaacagaaggatcaa
gttaaagatgaacctgtggatagcagcccatctaaaccagcaccatcaggacatgctcga
ggcacacctccggcatccaaatccaagcaaaagagaaaatcaggtgttgatgatgcaaaa
acttctagtggtgcagcttcaaagaaagcaaaggtggaattggatgcgaaagcatcaggc
ctcaaagaggaggcatcatctttggcaaaacctgcatcaaagacctctgctgcatcaaaa
agtgggacaagcgtatcacctgtcacagaggatgaaatcaggagtgttcttcttgcagtg
gctccagtcaccacacaagatctggtatccagattcaagtctaggcttcgaggtgcagag
gacaagaatgcatttgctgaaattctgaagaaaatttcgaagatacagaagacgaacggc
cacaactacgttgtcctcagagatgacaagaagtaa
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