Zea mays (maize): 100282562
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Entry
100282562 CDS
T01088
Name
(RefSeq) ribosome biogenesis protein NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
zma
Zea mays (maize)
Pathway
zma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100282562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zma03009
]
100282562
Enzymes [BR:
zma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
100282562
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
90S particles
Other 90S particles
100282562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
100282562
NCBI-ProteinID:
NP_001148942
UniProt:
B6T8Z1
A0A8J8XZS0
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Position
5:195804387..195807844
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AA seq
286 aa
AA seq
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MGRPYAVKGRKKKRKLEEAAAASDAAPPVEEAEELPPPEVRSGEEKSSEEDEAAAGEEEH
AAADGLPILPRTVDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPAD
YRPDIIHQALLAIFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLL
QKLSITAVGKREKLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSNDDEPLVF
VVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNIQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccttacgcggtgaaggggcggaagaagaagcgcaagctcgaggaggcggcg
gcggcctcggacgctgccccgcccgtcgaagaagcggaggagctgccaccgccagaggtg
agaagcggcgaggaaaagagcagcgaggaggatgaggcagcagcgggggaggaggagcac
gcggcggcggacgggctcccaatcctacccaggacggttgatgggaagcggcgacccggc
gccatcttcgtactcgagagggcctgcctcgaggtcggcaaagtcggcaagactatgcaa
attttgaactctgatgatcatgcgaattatttgaggaagcagaatcgcaatcctgcagat
tataggcctgatatcattcatcaggctctactagcaatatttgatagccctctaactaag
gctggaaggttacaggctgtttatgtgagaactgaaaagggcgtattgtttgaaatcaaa
cctcatgtccgcatgccaagaacctttaaacgtttctgtggtttaatgtcacaattgttg
caaaaactgagcattacggcagttggaaagcgtgagaagcttctcaacgttgttaaaaat
cctgtcactcgttatctacctgttggtgcacgtaagattggcctttcatttagtgctgag
aagtcagtcaacttgtttgactatgttgccaaatccaatgacgacgaacctcttgtgttt
gtggttggtgccatggcccatggaaagatcgacaaggaatatacagatgattacatacaa
atttgcaactaccctctcagtgctgcctgctgtttaaatcggatatgcagtgccctggag
cagaagtggaacatccaatga
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