KEGG   Zea mays (maize): 100282580
Entry
100282580         CDS       T01088                                 
Name
(RefSeq) ATP-dependent RNA helicase dhh1
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100282580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100282580
   03036 Chromosome and associated proteins [BR:zma03036]
    100282580
Enzymes [BR:zma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100282580
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100282580
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     100282580
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    100282580
SSDB
Motif
Pfam: DEAD Helicase_C TFIIA CMS1
Other DBs
NCBI-GeneID: 100282580
NCBI-ProteinID: NP_001148960
UniProt: A0A1D6Q5Y2 B6T965
LinkDB
Position
4:153130354..153138369
AA seq 522 aa
MDPRARYPSGVGNGRGGTPNYYGRGPSPQQPHQHHQQQQQQKQTSGAHHHQQYAQRQQQQ
HRHSHNHQQQQQQHQSHQQQQQQQQWLRRNQIAREAAGAAVTSEPKALAPSTAADGVNSS
SQDWKAQLKLPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIP
IALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELG
KHLKIQVMVTTGGTSLKDDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSMLIMDEAD
KLLSPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGI
TQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML
QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG
HLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDQAIYCQ
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatccacgcgccaggtatccttcgggcgtgggcaacggccgcggtgggacccctaac
tactacggccgcggcccatcgccgcaacagccgcatcagcaccaccagcagcagcagcag
cagaagcagacatcgggggcgcatcaccaccagcagtacgcgcagaggcagcagcaacag
caccgccacagccacaaccaccagcagcaacagcagcagcaccagagtcaccagcagcag
cagcaacagcagcagtggctgcggcggaatcagattgcccgcgaggccgcgggcgcagcc
gtgaccagcgagccgaaggccctggcgccatccacggccgccgacggcgtcaattcgagt
tcgcaagattggaaggcccaattgaagcttccacctcctgatacacgctacaggacagag
gatgttacagccaccaagggcaatgagtttgaagactattttctcaagcgtgaactccta
atgggtatttacgaaaagggatttgaaagaccctctcctattcaagaggaaagcattcct
attgctttaactggtagtgacattcttgcaagagcgaagaatggaactggcaagactgct
gcattttgtattcctgcactggaaaagattgatcaagaaaaaaatgctattcaagttgtt
atattggttcccacaagggaattggctctacaaacatcacaagtttgtaaggagcttggt
aaacatttgaagatccaagttatggtcaccactggtggaaccagcttgaaggatgatatt
gttcgtctgtaccaacccgtgcacttaattgttggaacacctggccgtattttggatctt
acaaagaaaggtgtttgcattttgaaggactgttcaatgcttattatggatgaggcagac
aagcttctctctcctgagtttcaaccttccatagaacagttgattcgctacctccctgct
agtcgacagattttgatgttctcagcgacattccctgtgactgttaaggagttcaaggac
aaatatcttcctaaaccttatgtgattaaccttatggatgaacttacactgaagggaatt
acgcagttctatgcttttgttgaagaacgacagaaagttcactgtctcaacaccctcttt
tccaagcttcaaatcaatcagtcaataatattctgtaactctgtaaatcgtgttgaacta
ttggcgaagaagatcacagagcttggttattcttgcttctatattcatgcaaagatgcta
caggaccaccgcaatagagttttccatgatttccgtaatggagcgtgcaggaatcttgtt
tgtactgatctttttacaaggggaatagatattcaagctgtgaatgttgttatcaatttt
gatttccccaagaactctgaaacatatctccacagggttggtagatctgggagatttggc
caccttggtctggccgttaatttgatcacctatgaggatcgatttaacttgtataggatt
gaacaagagcttgggactgaaataaaaccaattcctcctcagatagaccaggctatatat
tgccaatga

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