Zea mays (maize): 100282580
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Entry
100282580 CDS
T01088
Name
(RefSeq) ATP-dependent RNA helicase dhh1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100282580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100282580
03036 Chromosome and associated proteins [BR:
zma03036
]
100282580
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100282580
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100282580
mRNA degradation factors
5'-3' decay
Decapping complex
100282580
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100282580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
CMS1
Motif
Other DBs
NCBI-GeneID:
100282580
NCBI-ProteinID:
NP_001148960
UniProt:
A0A1D6Q5Y2
B6T965
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All DBs
Position
4:153130354..153138369
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AA seq
522 aa
AA seq
DB search
MDPRARYPSGVGNGRGGTPNYYGRGPSPQQPHQHHQQQQQQKQTSGAHHHQQYAQRQQQQ
HRHSHNHQQQQQQHQSHQQQQQQQQWLRRNQIAREAAGAAVTSEPKALAPSTAADGVNSS
SQDWKAQLKLPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIP
IALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELG
KHLKIQVMVTTGGTSLKDDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSMLIMDEAD
KLLSPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGI
TQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKML
QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFG
HLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDQAIYCQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgcgccaggtatccttcgggcgtgggcaacggccgcggtgggacccctaac
tactacggccgcggcccatcgccgcaacagccgcatcagcaccaccagcagcagcagcag
cagaagcagacatcgggggcgcatcaccaccagcagtacgcgcagaggcagcagcaacag
caccgccacagccacaaccaccagcagcaacagcagcagcaccagagtcaccagcagcag
cagcaacagcagcagtggctgcggcggaatcagattgcccgcgaggccgcgggcgcagcc
gtgaccagcgagccgaaggccctggcgccatccacggccgccgacggcgtcaattcgagt
tcgcaagattggaaggcccaattgaagcttccacctcctgatacacgctacaggacagag
gatgttacagccaccaagggcaatgagtttgaagactattttctcaagcgtgaactccta
atgggtatttacgaaaagggatttgaaagaccctctcctattcaagaggaaagcattcct
attgctttaactggtagtgacattcttgcaagagcgaagaatggaactggcaagactgct
gcattttgtattcctgcactggaaaagattgatcaagaaaaaaatgctattcaagttgtt
atattggttcccacaagggaattggctctacaaacatcacaagtttgtaaggagcttggt
aaacatttgaagatccaagttatggtcaccactggtggaaccagcttgaaggatgatatt
gttcgtctgtaccaacccgtgcacttaattgttggaacacctggccgtattttggatctt
acaaagaaaggtgtttgcattttgaaggactgttcaatgcttattatggatgaggcagac
aagcttctctctcctgagtttcaaccttccatagaacagttgattcgctacctccctgct
agtcgacagattttgatgttctcagcgacattccctgtgactgttaaggagttcaaggac
aaatatcttcctaaaccttatgtgattaaccttatggatgaacttacactgaagggaatt
acgcagttctatgcttttgttgaagaacgacagaaagttcactgtctcaacaccctcttt
tccaagcttcaaatcaatcagtcaataatattctgtaactctgtaaatcgtgttgaacta
ttggcgaagaagatcacagagcttggttattcttgcttctatattcatgcaaagatgcta
caggaccaccgcaatagagttttccatgatttccgtaatggagcgtgcaggaatcttgtt
tgtactgatctttttacaaggggaatagatattcaagctgtgaatgttgttatcaatttt
gatttccccaagaactctgaaacatatctccacagggttggtagatctgggagatttggc
caccttggtctggccgttaatttgatcacctatgaggatcgatttaacttgtataggatt
gaacaagagcttgggactgaaataaaaccaattcctcctcagatagaccaggctatatat
tgccaatga
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