Zea mays (maize): 100282605
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Entry
100282605 CDS
T01088
Name
(RefSeq) VAMP-like protein YKT62
KO
K08516
synaptobrevin homolog YKT6
Organism
zma
Zea mays (maize)
Pathway
zma04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100282605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100282605
Membrane trafficking [BR:
zma04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
100282605
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
100282605
NCBI-ProteinID:
NP_001148985
UniProt:
C0PMP6
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Position
8:complement(173017204..173021816)
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AA seq
210 aa
AA seq
DB search
MKITALLVLKPSTSGAGSSSSGGESGPEAVVLANAIDVSHFGYFQRSAAREFIVFVARTV
AQRTQSGQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNQVLDEYQKAYGDS
WKSVTADETQQWAFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLARGERLD
SLVEKSSDLSAASQMFYKQAKKTNQCCTIL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacggcgctcctggtgctgaagccgtcgacctctggagccgggagctcctcg
tccggcggcgagtcgggcccggaggcggtggtgctcgcgaacgcgatagacgtcagccac
ttcggctacttccagcgcagcgccgcccgcgagttcatcgtcttcgttgcccgcaccgtc
gctcagcgcacccagtcaggccagcggcagtccgtccagcacgaagaatacaaggtccac
tcccacaatagaaatgggctttgtgcggttgcattcatggatgatcattatccggtacgg
agtgcattttctcttctgaatcaggttcttgatgagtaccagaaggcttatggggactcc
tggaaatctgtgactgcagatgaaactcaacagtgggctttcctgacagacgccttgaca
aaatttcaggatcctgcggaagctgacaaattaatgaaaattcagagggacttggatgaa
acaaaaattatcctacataaaactattgagagtgtccttgccagaggagagagattggat
agcttggttgagaaaagctctgatctgagtgctgcttctcagatgttctacaagcaggca
aagaagacaaaccaatgctgcacaatactgtaa
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