KEGG   Zea mays (maize): 100282624
Entry
100282624         CDS       T01088                                 
Name
(RefSeq) SEC13-related protein
  KO
K14004  protein transport protein SEC13
Organism
zma  Zea mays (maize)
Pathway
zma03013  Nucleocytoplasmic transport
zma04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100282624
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100282624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100282624
   04131 Membrane trafficking [BR:zma04131]
    100282624
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100282624
Membrane trafficking [BR:zma04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100282624
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100282624
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100282624
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_IFT140_1st EIF3I NBCH_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 WDR90_beta-prop_4th WD40_2 WD40_RFWD3 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 100282624
NCBI-ProteinID: NP_001149004
UniProt: B6UBG2 A0A8J8XKU9 B6T9J3
LinkDB
Position
3:complement(3452781..3456296)
AA seq 305 aa
MPPHKIETGHQDVVHDIAMDYYGKRLATASSDNTIKIIGVSGTSHQQLATLSGHQGPVWQ
VAWAHPKFGSMLASCSYDGRVIIWKEGSKPDEWALAHTFAEHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFAARSDGGWDTTRIDQAHPVGVTSVSWAPAMAPGALISAGSSGQFEYVQ
KLASGGCDNTVKVWKLNNGSWRMDCFPALQMHKDWVRDVAWAPNLGLPKSTIASASQDGT
VVIWTAAKEGEQWDGRVLYDFRTPVWRLSWSLTGNILAVSDGNNNVTLWKEAVDGEWQQV
TTVEP
NT seq 918 nt   +upstreamnt  +downstreamnt
atgccgccccataagattgagactgggcatcaagatgtggtccatgatattgccatggat
tactacgggaagcgcctagctacagcctcctctgataacacaataaagatcattggcgta
agtggaacctcacaccagcagcttgcaaccttgagtggacaccagggcccagtatggcaa
gtcgcatgggctcatcccaagtttggttccatgcttgcatcctgcagctacgacggccgg
gtgatcatctggaaggaaggaagcaagcctgatgaatgggcactagcacacacctttgct
gagcacaagtcctccgtgaactccattgcatgggcgcctcatgagctgggtctatgcttg
gcttgtggttcatcagacgggaacatttcagtcttcgctgctcgttctgatggaggttgg
gacaccacacgtatcgaccaggcacatccagttggtgtgacctcagtttcctgggctcca
gcaatggcaccaggagctctaatcagcgcaggatcttctggccagtttgagtatgttcag
aaactcgcttctggtggctgcgacaacacggttaaggtgtggaagctcaacaatgggagt
tggcggatggactgtttccctgccctacagatgcacaaggactgggtgagagatgtcgcg
tgggccccaaacctgggccttccaaagtccaccatcgccagcgcctctcaggacggaacg
gtcgtcatctggacagcagcaaaagaaggtgagcagtgggacggccgggtgctgtatgat
ttcagaacccccgtttggaggctgtcgtggtcactgactgggaacatactggcggtttcc
gacggcaacaacaatgtgaccctgtggaaggaagctgtggatggcgaatggcagcaagtg
acgactgttgagccatag

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