KEGG   Zea mays (maize): 100282883
Entry
100282883         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100282883
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100282883
  09124 Replication and repair
   03420 Nucleotide excision repair
    100282883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    100282883
   03400 DNA repair and recombination proteins [BR:zma03400]
    100282883
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100282883
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100282883
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 100282883
NCBI-ProteinID: NP_001356176
LinkDB
Position
2:complement(167884256..167892301)
AA seq 328 aa
MDRPSGTSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEV
NSSVLNDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLSVHATDSDQ
TLEVTSNDLRSMDPKVCPVDQARAYQHALGGTDPFGANASNENRGILIVKLRRGQELRLR
AIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMETLTVEERISLIESSPTKVFELDSA
NQVVVKNAEAYTYDDEVIKHAEAIGKPGLVEITAKEDSFVFTVETTGAITAYELIMNAIT
VLRQKLDAVRLQDDDGDLGELGAHLGGP
NT seq 987 nt   +upstreamnt  +downstreamnt
atggaccgcccttccggcacatcgtaccagcgcttcccccgcgttcggatccgcgagctc
aaggacgactacgccaagttcgaactccgcgacaccgacgctagcatggccaacgccctc
cgccgcgtcatgatcgccgaagtcccaactgtcgccatcgatctcgtagagatcgaggtt
aactcctccgtcctcaacgacgagttcatcgcccaccgtctggggctcatcccgctcacc
tccgccgccgccatgcaaatgcgcttctctcgggactgcgacgcttgcgacggcgacggc
tcctgcgagtactgctccgtcgagtttcacctctccgtgcacgccaccgactccgaccag
acgctcgaggtcacatccaacgacctgagatccatggaccccaaggtctgcccagtcgac
caagcacgcgcctaccagcacgcgctcggaggcaccgacccctttggagccaatgcctcg
aacgaaaacaggggcatacttattgtaaagctgcgtcgggggcaagaactaaggcttcgt
gccatagctaggaaaggaattggcaaggaccatgccaaatggtcaccagctgctaccgtg
actttcatgtatgagcctgacatacgtatcaatgaagaactaatggaaacattgacggtg
gaagagagaataagcttgattgaaagcagccctacaaaagtatttgagcttgattctgcc
aatcaggtggtggtgaaaaacgcggaggcatacacctacgacgacgaggtgatcaagcac
gccgaggccatcgggaagccaggcttggtggagatcaccgccaaggaggacagcttcgtc
ttcaccgtagaaacaaccggcgccatcacagcctacgagctgatcatgaacgccatcacg
gtgctgaggcagaagctggatgccgtccgccttcaggacgacgacggcgaccttggcgag
ctcggcgcccaccttggtgggccttag

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