Zea mays (maize): 100283773
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Entry
100283773 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100283773
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zma03016
]
100283773
Enzymes [BR:
zma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100283773
Transfer RNA biogenesis [BR:
zma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100283773
Prokaryotic type
100283773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100283773
NCBI-ProteinID:
NP_001150144
UniProt:
C0P5B5
B6TLN6
LinkDB
All DBs
Position
5:198099191..198103959
Genome browser
AA seq
562 aa
AA seq
DB search
MAAASPPPSPPHAKRPKMSSSSDPEADAEPTSASAAVEGADPAQRRPRYKRRKVAILLGY
CGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRRYDWARAARTDKGVSAAAQV
VSGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKFCDRRRYLYLLPVFALDPSA
HPDREAVMASMGSGSELTKCLECSERGRKIPGVMGREGKLPSPGQNGVDAPVEGSSHDES
GTLGDAKCDHTSSDGNNPFAHGEVGSNSKEKPDLPVSGDRTEVANAKMGSNGDGAVVSSD
IYIGNEEKKLEPAATENKAQGMESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTH
NFHNFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVA
VMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEE
AEEFKVKYIFTHIAAMEHKEGAVALWLHSLNHRNYPDFRYMETAEHNPGAEVESIAAGAE
PKVGAEVENTEEVQMPSDNLSE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccgccgccctccccaccccacgcaaagcgccccaagatgtcctcc
tcctccgacccggaagccgatgctgagcccacctcggcctccgccgccgttgagggcgcc
gatcctgcgcagcgtcgtcccaggtacaagcgccgcaaggtcgccatccttctcgggtac
tgcggcgcggggtatcagggcatgcagaagaatccgggcgcgcgcaccatcgagggggac
ctcgaggaggcgctctaccaggcgggcgccgtgcccgaggccgaccggtccgcgccgcgc
cgttacgattgggcacgtgctgcgcgcaccgacaagggcgtcagcgccgcggcgcaggtg
gtgtccgggcgcttctacgtcgacccgccgggcttcatcgatcgcttgaacgcgcagctc
gcgccgcagatccgcgcttacggctacgtgcgcgttaccaactcattcaacgcgaaaaag
ttctgcgaccgccggaggtacctgtatctgcttcccgtatttgctcttgaccccagcgca
cacccggaccgcgaggccgtcatggcgagcatggggagtgggagcgagcttaccaagtgc
ctggagtgctccgagagaggcaggaagattcctggtgtcatgggccgggaggggaaactg
cccagccccgggcagaatggtgttgatgctcccgtggagggaagtagccatgacgaatct
ggaacacttggggatgcaaaatgtgaccatacaagttcagatggtaataacccatttgcc
catggggaagttggatcgaacagcaaggagaagcctgatttaccggtctctggtgataga
actgaagttgcaaatgcaaagatgggatcaaatggcgacggtgctgttgtatcatcagat
atttatattgggaacgaggagaagaaacttgagcctgcagccactgaaaataaagctcaa
ggtatggaatctgagaagatcaatggagaagagaaactgccaactaagagtaccttttct
tacactgatgaagtgaaggagaggttcaacaggattctcaagtactatattgggacacac
aatttccataacttcactacaagaaccaaagcagaggatcctgcagcaaaaagatttatc
atttcctttgctgctgaccgtgttgtcagcctggatgggattgattttgtcaggtgtgaa
gttgttggacagagtttcatgctccatcagatccggaagatgattggtcttgctgtagct
gtgatgaggaactgtgcacctgaatcaatttatgatgtcgcttttcgcaaggatgtcaat
cttaatgtgcctactgcacctgaggtcggactgtacctagatgaatgtatgttcacatca
tacaacaagaaatggaaggattcacatgaggcagtttccatggaaccttattctgaggag
gccgaagagttcaaggtcaagtatattttcactcatattgcggcgatggaacacaaggag
ggagctgtagctttgtggttgcattcattgaaccacagaaattatccagatttccgttac
atggaaactgccgagcacaatcctggtgctgaagttgagagtattgctgctggtgcagag
cccaaggttggagctgaagttgagaatactgaagaagtacagatgccaagcgacaatcta
agtgagtaa
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