Zea mays (maize): 100283893
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Entry
100283893 CDS
T01088
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100283893
09122 Translation
03013 Nucleocytoplasmic transport
100283893
03015 mRNA surveillance pathway
100283893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100283893
03041 Spliceosome [BR:
zma03041
]
100283893
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100283893
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
100283893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
100283893
NCBI-ProteinID:
NP_001150263
UniProt:
B6TMU5
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All DBs
Position
1:298408181..298424017
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AA seq
196 aa
AA seq
DB search
MGRAAEEEGDVEFADYDLDDEDAMEEDGRAARALPVPRIVSPAVVRTRGRFVGRSPSVLT
SSRYRFDFTTNNGDHGPIPLPQRSIEGWAILVSGVKDDAEEDDLYNAFSDFGHVKDLHLN
LERRTGYAKGYALIEYENFEEAQAAIRAMNGSQLFTKTINVDWAFSRGPIQNFKSARPSR
PRSRTPPRRLAALTPY
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagcggcggaggaggagggtgacgtggagtttgctgactacgacctggacgac
gaggacgccatggaggaggacggccgcgccgcccgtgcgctccccgtgccccgcatcgtc
tcccccgccgtggtgcgcacccgcgggcgcttcgttggtcgcagcccctccgttctcacc
tccagccgctaccgcttcgacttcaccactaacaacggagaccatggtcccatcccacta
ccgcagcgctctatcgaaggctgggcaattcttgtttctggagttaaagacgatgctgaa
gaagatgatctttacaatgctttcagtgattttggtcatgtcaaggacttgcatctcaat
ctagaacgccgcactggatatgccaagggatacgcgctgattgaatacgaaaactttgag
gaagcacaagcagcgatcagagcaatgaacgggagtcagctgttcacaaaaactatcaat
gttgactgggcattcagcagaggtcctatacagaatttcaagagtgcaaggccatcacgc
ccaagatctaggactcctccgcgcaggcttgctgccttgacgccatattga
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