Zea mays (maize): 100284356
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Entry
100284356 CDS
T01088
Name
(RefSeq) pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zma
Zea mays (maize)
Pathway
zma00040
Pentose and glucuronate interconversions
zma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100284356
Enzymes [BR:
zma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100284356
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100284356
NCBI-ProteinID:
NP_001150723
UniProt:
B6TSP4
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All DBs
Position
9:88802313..88804175
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AA seq
451 aa
AA seq
DB search
MVDGFRWIRPGSFVLYLVFFFLSAALSEANIGDFDEYWQQRKLMADAAAEATYKHDPVEV
ANQLNRAVHRSVEKDDIGTRREMMGTTTRKSKFSGPCRATNPIDRCWRCRQDWATDRKRL
ARCAKGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWGVIQIEPLWITFAKTMIITL
KEELIIRGDKTIDGRGVQVRITNGAQLTLQFVNNVIIHNIHINDIVSSNKDGGYVRDSPD
HFGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVML
FSSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPT
IISQGNRYIAPPNLAAKQVTKQHDTPESVWKNWVWHSENDLFMEGAYFTVTGGQINRQFN
KKDLIKPRNGSYVTRLTRYAGSLACTPGKPC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgggttccgatggatcagaccgggctctttcgtcctgtacttggtcttcttc
ttcctgtccgcagccctgtcggaggccaatatcggcgacttcgatgaatactggcagcag
cgcaagctcatggccgacgccgcggctgaggccacgtacaagcatgacccggtcgaggtc
gccaaccaacttaaccgtgcagtccacagatccgtcgagaaggatgacattggcacgagg
cgggagatgatggggacgacgacgaggaagtctaagttcagcgggccgtgcagggcgacg
aacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctg
gcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctac
gtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtgg
ggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgctt
aaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgc
atcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatc
cacatcaacgacatcgtctcctccaacaaggacggcggctacgtccgcgactcgccggac
cacttcggctggcgcaccgtctccgacggcgacggcatcaccgtcttcggctccaccaac
gtgtggctggaccacctctccctctccaactgccaggacggcctcatcgacgtcatcgcc
aagtccaccggcgtcaccatctccaactgccacctcaccaaccacaacgatgtcatgctc
ttcagctccagcgacaagcatcccgaggaccagatcatgcagatcactgtcgccttcaac
cacttcggcagaggcctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtg
gtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaaggcccccacc
atcatcagccagggcaaccgctacatcgcgccgcccaaccttgccgcgaagcaggtcacc
aagcagcatgacacgccggagtcggtgtggaaaaactgggtgtggcactccgagaacgac
ctcttcatggaaggcgcctacttcaccgtcaccggcggccagatcaacaggcagttcaac
aagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacgcgctacgcc
ggctccctcgcctgcacgcccggcaagccctgctag
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