Zea mays (maize): 100285059
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Entry
100285059 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100285059
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100285059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100285059
Spliceosome [BR:
zma03041
]
Complex B
Other components
Prp19-related factors
100285059
Complex C
100285059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH
zf-CCCH_3
zf-CCCH_10
zf-CCCH_4
RRM_3
zf-CCCH_PARP12
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100285059
NCBI-ProteinID:
NP_001359093
UniProt:
K7VE89
LinkDB
All DBs
Position
9:17231046..17236052
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AA seq
493 aa
AA seq
DB search
MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPRSDVNREYFAE
EHDRRARAGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDSRIT
EQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGK
PQAPKPEEDESGRLGQVSHGGLLPRAVISQQQSGDQPQPPGMEGQQQQAAPASYYFNIPA
PPATERTVYPSMDPQRMGAIVKPHDSEGKPGPQQAGQAQASSNPAQGGGYPAPPPYYHGQ
YPPYYPPPPPYGGYMPPPRMPYPPQYPPYQPMLAQPAQVQASSSRQPPHAGGGQQQPPDG
PPAQQQPQQPIQN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccggctgctgcgggacgcgcaggcggacgggtgggagcggtcggacttcccc
atcatctgcgagtcatgcctcggcgacaacccctacgtccggatgttaagagctgaatat
gacaaagaatgcaaaatttgtgcacgtccttttactgtattccggtggcgtcctgggcga
gatgcaaggtacaagaagactgagatctgccagacatgttgcaagctaaagaatgtctgc
caggtctgcctgctggatcttgaatatggtctgcctgttcaggtccgagatacagcactc
tctatcaattccaatgatgcaattccaaggagtgatgtcaatcgcgaatattttgcagaa
gagcatgataggagggccagagctggcatagactatgattcatcctatgggaaggctcgc
ccaaatgataccattctgaagcttcaaaggacagcaccatattacaagaggaacagagct
catgtttgcagtttctttgtgcgaggtgaatgtacaagaggagctgagtgcccttatcgt
catgagatgcctgaaactggggagttatctcagcagaacattaaagatcgctactatgga
gttaatgatccagttgcactgaaacttttgagcaaggcaggtgagatgccatccctgaca
ccaccagatgatgagactataaggaccctctacattggcggactcgatagcagaataacc
gagcaggatttgagggatcagttttatgcccatggtgagatcgagtccataaggatggta
cttcaacgtgcaatcgcatttgtgacgtatactacaagagaaggcgcagagaaggctgca
gaagagcttgctaataagctagtcatcaagggcgtgcgcctgaagctgatgtggggcaag
cctcaggccccaaagcctgaggaggatgagtctgggaggctggggcaggtttcccacgga
gggctgctccctagggctgtcatatctcagcagcagagcggtgaccagcctcagcccccc
gggatggagggccaacagcaacaggctgcaccagcatcgtactacttcaacattccagca
ccaccagcaacggagcggactgtgtatccatccatggatccacagaggatgggtgctata
gtaaaaccacatgacagtgaaggcaaaccagggccgcagcaagccgggcaagctcaggca
tcaagcaacccagcacaagggggcggctatcctgcaccaccgccatactaccatggtcag
tatccaccatactatccacccccaccaccatacggtggctacatgcctccaccgcgcatg
ccctacccaccgcaatatccgccttaccagccgatgctagctcaaccagcacaggtacag
gctagttcatctcggcaaccaccgcatgcaggtggagggcagcagcagccgcctgatggc
cctccagctcagcagcagccacagcagccaattcagaactga
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