Zea mays (maize): 100285161
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Entry
100285161 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100285161
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zma
Zea mays (maize)
Pathway
zma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100285161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100285161
03036 Chromosome and associated proteins [BR:
zma03036
]
100285161
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100285161
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100285161
PBAF complex
100285161
GBAF(ncBAF) complex
100285161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF4930
Motif
Other DBs
NCBI-GeneID:
100285161
NCBI-ProteinID:
NP_001357631
LinkDB
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Position
2:complement(38762612..38766889)
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AA seq
557 aa
AA seq
DB search
MSPPAAGAAANSGDGTPPSPRELYTIPASSGWFRWDGIHETERRALPEFFGGAGGAGFGT
ATRNPRIYREYRDFIIAKYREDPARRLTFTEVRRALVGDVTLLRKLFAFLDSSGLINFSA
SSSSVPASRQQEVGVVVEAPVGLQVTPRPPASYFAEEKRVAAGGEKENEFRLPPLTSYSD
VFGEWAPGKAPICGFCGEECNGADVETLQDGFKVCSKCSKSNNDNIKEEANKCPGDKKEN
MENHASSAWTDTETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIAMLIQLPFGEHMLGTI
NGKFVSRLHINQTDDGKTNQHIMESSSHSTEMADGMQIDGSEDSADKSVEEYPTKRRRLF
FSMDATTSLMEQLAILTTAASPDVAAAAADAAIKAFGNENPQARKAFRLNEQEYKTKAFA
SNHVQQIDHKVSNKDTAMHGQSGSDKQEKKFIASAYQLRAAVATAVGVAAARAKMLADQE
EREMELLMASVIETQLRKMQYKIKHFEELDSLMDQEYTAIQQMKGSLMNEWIKVLEHAFR
AGVSLPRDELLTKLLLN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccggctgccggcgcggccgccaactccggcgacgggacgcctccgtcgccg
cgcgagctctacaccatcccggcatcatccggttggttccggtgggacgggatccacgag
acggagcggcgggcgctgccggagttcttcggaggggcaggcggcgctgggttcgggacg
gcgacgcggaacccgcggatctaccgcgagtaccgcgacttcatcatcgccaaataccgg
gaggacccggcgcgccgcctcactttcaccgaggtccgcagggcgcttgtcggggacgtc
acgctcctccggaagctctttgccttcctcgactcctccggcctcatcaacttctcggcc
tcctcgtcctcggtccccgcgtcgcggcagcaggaggtgggggtcgtcgtggaggcgccc
gtgggtctgcaggtgacgccgcgtcctccagcgtcctacttcgccgaagagaagcgtgta
gcggcgggcggggagaaggagaacgaattccggttgccgccgctgacctcctacagtgat
gtgttcggggaatgggcacctgggaaggcgcctatatgcggtttttgcggtgaggagtgc
aatggtgcggatgttgagacgctgcaggatggttttaaagtatgttcaaaatgttccaaa
agcaataatgataatatcaaggaagaggcgaataaatgtcctggtgacaaaaaagagaat
atggaaaatcatgcttccagtgcatggacagacactgagacgttactccttttagaagga
gtcctaaaacatggagatgattgggatcttatcgctcagcatgtccgcacaaagaataaa
tcagaatgcatagcaatgcttattcaattaccttttggcgaacatatgctgggcacaata
aatggtaaattcgttagcaggctccacataaaccagacagatgatggaaaaacgaaccag
cacattatggagtcttcaagtcactcaaccgaaatggctgatggcatgcagattgatgga
agtgaagatagtgctgataaatcagttgaagaatatcctacaaaacgcagacgattgttt
ttttcaatggatgctaccacttcattgatggagcagttagctatcctgaccacagcagct
agcccagatgttgctgctgctgctgctgatgccgcaattaaagcatttggcaatgaaaac
ccgcaagcaaggaaagcctttcgcctcaacgagcaagaatataagactaaggcttttgct
tctaatcatgtccaacagattgaccacaaagttagcaataaggatacggcgatgcatggc
cagagtggttctgataagcaggaaaagaagttcattgctagcgcatatcaattgagggca
gctgttgctactgctgttggtgtagctgctgcccgtgctaaaatgcttgcagaccaggag
gagcgagaaatggagctcctaatggcgtctgtaattgaaactcagctaagaaagatgcaa
tacaagatcaaacactttgaggagctagattcactcatggatcaagagtacaccgctata
cagcaaatgaagggatccctcatgaatgaatggataaaggtccttgagcatgcattccgg
gctggagtgtctctaccgagagatgaattgctcaccaaactgttgctgaactag
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