Zea mays (maize): 100285823
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Entry
100285823 CDS
T01088
Name
(RefSeq) pre-mRNA-splicing factor PRP17
KO
K12816
pre-mRNA-processing factor 17
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100285823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100285823
Spliceosome [BR:
zma03041
]
Complex C
Other components
Step II factors
100285823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
100285823
NCBI-ProteinID:
NP_001354267
UniProt:
K7VKY1
LinkDB
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Position
9:127527047..127530391
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AA seq
572 aa
AA seq
DB search
MDLLQSSYAPDDASSPEASAAASSPDSSPLRLPSKSAAPAVDDTALALSSAASAARPLDP
SLHLVAFNPTADQLWAPILGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYAADPSGLHIVGDAQPQAPEPDTVYNLAPSEHKRRRLLAKADNEAELAPPEAKNPAS
EEWILHNKQSPWAGKKEAPPAELTDEQKQYAEAHAAKKAEKEARLEGKSERTEVVVKTTF
HGKEEKDYQGRSWITPPKDAKATNDHCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSA
SMDCKIKIWDVLGSRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSMSLHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLK
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcctcttacgcgccggacgacgcgtcgtctccggaggcttcggcg
gccgcgtcctcgccggactcctcgccgctccgccttccgtccaagtccgccgcccccgcc
gtcgatgacaccgcgctcgcactctcctccgcggcgtccgccgcccgcccactcgaccct
tcgctccacctcgtcgccttcaacccaactgctgaccagctctgggctcccatcctcggg
ccccagcacccccacgccccgatctcgtccgcctccggcaaccgcaaccacaagctcggc
cacgttgaggacgccgctgtcctgccattcctattcgacgagcagtacaacaccttccat
cggtttggctacgccgccgacccgtctggcctccacatcgtcggcgacgcccagccccag
gcgcctgagcccgacactgtctacaacctcgccccttccgagcacaagcgccgtcgcctc
ctggccaaggcggacaacgaggcggagctagcccccccggaggcaaagaaccccgcctcc
gaggaatggatcctccacaacaagcagagtccctgggctgggaagaaggaagcgcctccc
gcggagctcactgacgagcagaagcagtatgcggaggcgcacgctgccaagaaggccgag
aaggaggcccgcctcgaagggaagagcgagaggacagaggttgtggtcaagaccaccttc
cacggcaaggaggagaaggactaccaaggacgctcctggatcacgccgcccaaggatgcc
aaggccacaaacgaccactgctacatccccaagaggtgtgtgcacgagtgggtcggtcac
accaagggggtctcagctatcaggtttttcccgaagtatggacatttgctgctctctgcg
agtatggattgcaagattaagatctgggatgttcttgggtcacggacatgtatgcgtacc
tatatggggcactcaaaggcggtaagggatatatcattctccaatgacgggactaagttc
ttgagcgctgggtatgacaggaatatacagtactgggatactgagacagggcaggtgatc
tcgaccttttcaactgggaaggtcccatatgttgtgaagctcaatcctgatgaggataag
cagcatattctccttgccggaatgagcgataagaagattgtgcaatgggatatgaagtca
gggcagattacacaagagtatgatcagcatttaggggctgtgaacaccataacttttgtg
gataacaacaggagatttgtgacctcaagtgatgacaagtctcttcgtgtgtgggagttt
ggcatccctgtggtgattaagtacatcagtgagccgcacatgcattcaatgccatcgatg
tcactgcatcccaactccaattggctggcagcacagagtttggacaatcagatactgata
tacagcaccaaggagaggtttcagcttaataagaagaagagatttgctggccacattgtg
gcaggttatgcttgtcaggtgaacttctcacctgatgggaggtttgtgatgtctggtgat
ggcgagggtagctgctggttctgggactggaaaagctgcaggagattcaagactttgaag
tgtcacaacggggtttgcattggatgtgagtggcatccgttggaaactagcaaggttgca
acctgtggatgggatggtgtaattaaatactgggactga
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integrated database retrieval system