Zea mays (maize): 100285873
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Entry
100285873 CDS
T01088
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100285873
09123 Folding, sorting and degradation
03018 RNA degradation
100285873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100285873
03041 Spliceosome [BR:
zma03041
]
100285873
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100285873
mRNA degradation factors
5'-3' decay
Lsm complex
100285873
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100285873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
100285873
NCBI-ProteinID:
NP_001152235
UniProt:
C4IYC2
B6UB12
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All DBs
Position
3:complement(36668944..36673519)
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AA seq
146 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDVGAKPGGRGIGRGQDDG
GRGSGGRGRGGVGAKGGNKGGGRGRG
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctcctcaagaccgcccaggggcaccccatgctcgtggagctgaag
aatggtgagacatacaacgggcatctggtcaattgcgacacgtggatgaacatccatctt
agggaggttatttgcacctcaaaggacggtgacaagttttggaggatgccagagtgttac
attcgcgggaacaccattaagtatcttcgagttcctgatgaggtgattgacaaggttcag
gaggaaacttctaaaagccgatcagataggaagccaccaggtgttggccgtggaagagga
aggggggacgtcggtgctaaacctggaggcagaggcattggacgtggccaagatgatgga
ggtagaggcagtggtggccgtggaaggggtggagttggtgccaaaggtggtaacaaaggt
gggggccgtggtcgtggctga
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