Zea mays (maize): 100286002
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Entry
100286002 CDS
T01088
Name
(RefSeq) pre-mRNA-splicing factor prp45
KO
K06063
SNW domain-containing protein 1
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100286002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100286002
Spliceosome [BR:
zma03041
]
Complex B
Other components
Prp19-related factors
100286002
Complex C
100286002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
100286002
NCBI-ProteinID:
NP_001152362
UniProt:
B6UCY8
A0A8J8XG73
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Position
4:184593394..184595691
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AA seq
609 aa
AA seq
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MATLKDLLPAPKTSASTFYDHSSDPWFKERYGGESAQAAAATRPAAAARPVPPYGKRTGF
VPRRPEDFGDGGAFPEIHVAQYPLGMGRRDDKGGSKILALTVDAHGSVAFDAVVKQGENA
GKIVYSKHSDLVPKIATADSQATSDDDEEQKQIEETTERTKAALEKVVNVRLSAAQPKNV
PTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQRARMERTGAPPAPSGVPAG
GGRGAIQDVDEVMDMEQPREPRESREQRRESREEREGRIERDRIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQ
YNIYSKGLFTAQSTMSTLYRPKKDGDSDVYGDADEQLEKVMKTERFKPDKGFTGASERTG
KRDRPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASGGSSMRDDYDGGSGR
SRINFERGR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctcaaggatctcctaccggcgcccaagacgtcagcgtccaccttctacgac
cacagcagcgacccctggttcaaggagcggtacggtggggagtcggcgcaggcggccgcg
gcgacgaggcccgcggccgccgcccggcccgtgccaccttacggaaagcggacggggttc
gtgccgcgacggccggaggacttcggggatggcggcgcctttccggagatccacgtcgcg
cagtatccgctcggcatgggacgccgtgatgataagggcggatccaagatccttgcgctc
accgtcgacgcacacggcagcgtcgccttcgacgccgtcgtcaagcagggggagaacgca
ggcaagatcgtctactctaagcatagcgacctcgtgccgaagatagccactgccgattcc
caggcgacgtcggacgacgacgaggagcagaagcagatcgaggagacaactgaacggacc
aaggccgccttggagaaggttgtcaacgtccgcctctctgcagctcagcccaagaatgtg
ccgactcatgattctgagtccaagttcatcaagtataagccgtcacagcaatccgcggcc
ttcaattcaggtgcaaaggagaggatcattaggatgtcagagatggcggtggatcctctt
gagccaccaaagttcaagcacaagcgtgtgccccgggcgtctgggtcaccacctgtacca
gtgatgcactcgccgccacggccagttacagtgaaggaccagcaggattggaagatccca
ccttgtatttcaaattggaaaaatccaaagggttacacgattccgcttgataagaggttg
gcggctgatgggaggggtctgcaggaggtgcagatcaatgataactttgcaaagctttct
gaagcattgtacgtggcagagcagaaggcgagggaggcagtgcagatgcgctccaaggtt
cagagggaacttatgctgaaggagaaggagagaaaggagcaagagctaagggcacttgca
cagagggcacgtatggagaggactggtgccccacctgcaccatcaggtgtgcctgctggt
ggtggcaggggagcaattcaggatgttgatgaagttatggatatggagcaaccgcgtgaa
ccacgggaatcacgtgagcagcgcagggagtctagagaagagagggaaggaaggattgag
cgtgatagaatccgtgaggagcgcagacgcgagagggagagggagaggaggcttgaagcc
aaggatgctgcaatgggcaagaagagtaagatcacaagggacagggatcgtgatatcagt
gagaagattgctcttggtatggcaagcactggtggtgcaaaaggtggtgaggttatgtat
gaccagcgtctgttcaaccaggacaagggaatggactctggttttgccacagatgatcag
tacaatatctactctaagggtctcttcacagcgcagtccacgatgtccacgctatacagg
cctaagaaggatggggattctgatgtatatggtgatgcagatgaacagttggagaaggtt
atgaagactgagaggttcaagcctgacaagggatttactggtgcttcagagaggactggc
aagcgagacaggcctgtggagttcgataagcaggaagaaaatgatccatttggtctggat
cagttcttgactgaggtgaagaagggtaagaaagctgtggagaagattggaggtggagga
accatgaaggcgagtggtgggtcctcaatgagggatgattatgatggtggatctgggagg
tcccgcatcaactttgaaagggggcgctga
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