KEGG   Zea mays (maize): 100286002
Entry
100286002         CDS       T01088                                 
Name
(RefSeq) pre-mRNA-splicing factor prp45
  KO
K06063  SNW domain-containing protein 1
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100286002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    100286002
Spliceosome [BR:zma03041]
 Complex B
  Other components
   Prp19-related factors
    100286002
 Complex C
    100286002
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 100286002
NCBI-ProteinID: NP_001152362
UniProt: B6UCY8 A0A8J8XG73
LinkDB
Position
4:184593394..184595691
AA seq 609 aa
MATLKDLLPAPKTSASTFYDHSSDPWFKERYGGESAQAAAATRPAAAARPVPPYGKRTGF
VPRRPEDFGDGGAFPEIHVAQYPLGMGRRDDKGGSKILALTVDAHGSVAFDAVVKQGENA
GKIVYSKHSDLVPKIATADSQATSDDDEEQKQIEETTERTKAALEKVVNVRLSAAQPKNV
PTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQRARMERTGAPPAPSGVPAG
GGRGAIQDVDEVMDMEQPREPRESREQRRESREEREGRIERDRIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQ
YNIYSKGLFTAQSTMSTLYRPKKDGDSDVYGDADEQLEKVMKTERFKPDKGFTGASERTG
KRDRPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASGGSSMRDDYDGGSGR
SRINFERGR
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcgacgctcaaggatctcctaccggcgcccaagacgtcagcgtccaccttctacgac
cacagcagcgacccctggttcaaggagcggtacggtggggagtcggcgcaggcggccgcg
gcgacgaggcccgcggccgccgcccggcccgtgccaccttacggaaagcggacggggttc
gtgccgcgacggccggaggacttcggggatggcggcgcctttccggagatccacgtcgcg
cagtatccgctcggcatgggacgccgtgatgataagggcggatccaagatccttgcgctc
accgtcgacgcacacggcagcgtcgccttcgacgccgtcgtcaagcagggggagaacgca
ggcaagatcgtctactctaagcatagcgacctcgtgccgaagatagccactgccgattcc
caggcgacgtcggacgacgacgaggagcagaagcagatcgaggagacaactgaacggacc
aaggccgccttggagaaggttgtcaacgtccgcctctctgcagctcagcccaagaatgtg
ccgactcatgattctgagtccaagttcatcaagtataagccgtcacagcaatccgcggcc
ttcaattcaggtgcaaaggagaggatcattaggatgtcagagatggcggtggatcctctt
gagccaccaaagttcaagcacaagcgtgtgccccgggcgtctgggtcaccacctgtacca
gtgatgcactcgccgccacggccagttacagtgaaggaccagcaggattggaagatccca
ccttgtatttcaaattggaaaaatccaaagggttacacgattccgcttgataagaggttg
gcggctgatgggaggggtctgcaggaggtgcagatcaatgataactttgcaaagctttct
gaagcattgtacgtggcagagcagaaggcgagggaggcagtgcagatgcgctccaaggtt
cagagggaacttatgctgaaggagaaggagagaaaggagcaagagctaagggcacttgca
cagagggcacgtatggagaggactggtgccccacctgcaccatcaggtgtgcctgctggt
ggtggcaggggagcaattcaggatgttgatgaagttatggatatggagcaaccgcgtgaa
ccacgggaatcacgtgagcagcgcagggagtctagagaagagagggaaggaaggattgag
cgtgatagaatccgtgaggagcgcagacgcgagagggagagggagaggaggcttgaagcc
aaggatgctgcaatgggcaagaagagtaagatcacaagggacagggatcgtgatatcagt
gagaagattgctcttggtatggcaagcactggtggtgcaaaaggtggtgaggttatgtat
gaccagcgtctgttcaaccaggacaagggaatggactctggttttgccacagatgatcag
tacaatatctactctaagggtctcttcacagcgcagtccacgatgtccacgctatacagg
cctaagaaggatggggattctgatgtatatggtgatgcagatgaacagttggagaaggtt
atgaagactgagaggttcaagcctgacaagggatttactggtgcttcagagaggactggc
aagcgagacaggcctgtggagttcgataagcaggaagaaaatgatccatttggtctggat
cagttcttgactgaggtgaagaagggtaagaaagctgtggagaagattggaggtggagga
accatgaaggcgagtggtgggtcctcaatgagggatgattatgatggtggatctgggagg
tcccgcatcaactttgaaagggggcgctga

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