Zea mays (maize): 100286025
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Entry
100286025 CDS
T01088
Name
(RefSeq) lyase precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
100286025
Enzymes [BR:
zma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
100286025
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
100286025
NCBI-ProteinID:
NP_001152385
UniProt:
A0A1D6H3H9
A0A8J8XXP5
B6UDB9
C4J5N7
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Position
5:complement(113921246..113925452)
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AA seq
724 aa
AA seq
DB search
MAAATVVGGTWTRTSRSSLSLVVVFLLLHMGVGATATPPRHHTAAASGITLRVDDYLHQV
AVDNGLVQVTLSKPQGHITGVRYNGHRNLLHYDGSQNSGGYWDVVWNYPGSDQPGGMMDT
LDSTEFKVVVSSEDQVELSFSSAYTPSSPTSVHLHVDKRLVVLKGSSGFYCYAILEHARD
WPALNVTEARLAFKLNTDAFKYMAVSDDIQRYMPSAADRAEPRGAPLAYKEAVLLVNPQE
PRFRGEVDDKYQYSMDNKDSTVHGWTTAGGVERSPNDNPVVGFWVITPSNEFKSGGPTKR
ELTSHVGPTTLTMFLGTHYVGNDIVLSISGGEYWKKVMGPVFVYLNSRPRRGGIGGCDHS
RALWADAKAQARAEAGKWPYSFPKSPDFAKAGERGGVTGRLLVRDDDRFTTDDDNNDAAA
APMPVGTEAYVGLAAPGQAGSWVTECKGYQFWTATTATEDGFVFTIANVREGVYSLYAWV
PGVLGEYVHASPVTVAVGGAVVDLGDLVFRPPRSGPTLWEIGVPDRKAAEFFVPDVDPRF
ANRLFLHKDRYRQYGLWARYAELYPDGDPVFTVGRSEPWKDWFFAHVTRKVGEGRYAPTT
REIRFRLYRVVADGTYTLRVSLAAAHMSRLQVRVNGRGGGGAAELTTPEFGGGNAIARHG
IHGVQWNFQFPIRGYLLREGDNSVSITQTRADGEFLGVLYDYVRLEAPPAHCRDPTATAT
TWRT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgactgttgttggcggaacgtggacgagaacatcaaggtcgtcgttgtcg
ctagtggtggtattcctgctgctacacatgggcgtcggagccactgcgacgccgccgcgg
caccacaccgccgccgccagtggcatcacattgcgcgtcgatgactatctgcatcaggtg
gctgtggacaacggcctggtgcaggtgacgctgtccaagccacagggccacattaccggc
gtccgctacaacggccaccgcaacctcctgcactacgacggcagccaaaactcgggaggg
tattgggatgtggtgtggaactacccgggctccgatcagccaggaggaatgatggacacg
ttggacagtacggagttcaaggtggtggtttcaagcgaggaccaagtggagctttctttc
agcagcgcctacactccgtcgtcgccaactagtgttcacctgcatgtcgacaagaggctc
gtggtactgaaaggcagctccgggttctactgctacgccatcttggagcacgcccgcgac
tggcccgccctcaacgtcaccgaggccaggctcgccttcaagctcaacacggacgcgttc
aagtacatggcggtctcggacgacatccagaggtacatgccgagcgcggcggacagggcc
gagccacgtggcgccccgctcgcctacaaggaggccgtgctgctggtgaacccgcaggag
ccacggttcaggggcgaggtggacgacaagtaccagtactccatggacaacaaggacagc
accgtgcatggatggaccacggccggcggcgtagaacgctcgccgaacgacaaccccgtc
gtcggcttctgggtcatcacgcccagcaacgagttcaagagcggaggacccaccaagcgg
gagctcacctcccacgtcggccccaccacgctcacgatgtttctggggacgcattacgtc
ggtaacgacatcgtgctcagcatcagcggcggcgagtactggaagaaggtgatgggccct
gtcttcgtgtacctcaactcccgcccgaggcgaggcggcatcggcggctgcgaccacagc
cgggcgctctgggcagacgccaaggcgcaggcgcgggcggaggccggcaagtggccctac
agcttcccaaagtcaccggacttcgccaaggccggagagaggggcggcgtcaccggcagg
ctgctggtcagggacgacgacaggttcacgaccgacgacgacaataacgacgcggccgcc
gctcccatgcccgttgggacggaggcgtacgtgggtctcgcggcgcccgggcaggccggc
agctgggtaacggagtgcaagggctaccagttctggacagcgacaacggcgacggaggac
ggcttcgtattcaccatcgccaacgtccgggagggagtgtacagcctctacgcgtgggtt
cccggggtcctcggagaatacgtgcacgcttccccggtgaccgtggcggtaggcggcgcc
gtcgtcgacctcggcgacctcgtgttccggccccccaggtcgggcccgacgttgtgggag
attggggtccccgaccggaaggccgcggagttcttcgttccagacgtggatccccgattc
gccaacaggctcttcctgcacaaggacaggtacaggcagtacggtctgtgggcgaggtac
gccgagctgtaccctgacggcgaccccgtcttcaccgtcggccggagcgaaccttggaag
gactggttcttcgcgcatgtcaccaggaaggtaggcgaaggccggtacgcgccgacgacg
cgggagatccgattcaggctgtaccgcgtcgtggccgacggcacgtacacgctgcgtgtg
tcgctcgctgccgcgcacatgtccaggctgcaggtgcgcgtgaatgggcggggcggtggc
ggtgcggcggagctgaccacaccggagttcggcggcgggaacgccatcgcgcgccacggg
atccatggagtgcagtggaacttccagttcccaatcaggggatacctgctgcgggaaggc
gacaacagcgtcagcatcacgcagaccagggccgacggcgagttcctaggtgtcttgtac
gactacgtccgcctcgaggcacctccggcgcactgccgagaccccacggccacggcgacg
acgtggcgtacatga
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