Zea mays (maize): 100286122 Help Entry 100286122         CDS       T01088                                  Name (RefSeq) ubiquitin ligase protein COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism zma  Zea mays (maize) Pathway zma04120   Ubiquitin mediated proteolysis zma04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:zma00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100286122  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     100286122  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:zma04121]     100286122 Enzymes [BR:zma01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100286122 Ubiquitin system [BR:zma04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     100286122   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      100286122 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR19_1st DSE1_N WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_DCAF4 Beta-prop_EIPR1 EIF3I Beta-prop_HPS5 zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 zf-C3HC4 ASA1 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR75_1st WD40_like zf-C3HC4_3 Beta-prop_Aladin Beta-prop_WDR41 zf-RING_UBOX PAC11 zf-RING_2 eIF2A zf-C3HC4_4 Beta-prop_SCAP CFAP251_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N zf-RING_5 zf-rbx1 U-box Beta-prop_WDR75_2nd Prok-RING_4 Motif Other DBs NCBI-GeneID:  100286122 NCBI-ProteinID:  NP_001152482 UniProt:  A0A1D6HLL0 B6UEN7 LinkDB All DBs Position 5:complement(219135344..219144164) Genome browser AA seq 693 aa AA seqDB search MGDSSVAGALVPSVPKPEPAPSGDTSAAAAATTAALAMPEEAGMRAASASPQGPAEEGEG PADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCCGHYLTKAQLYPNFLL DKVLKKISAQQIAKTASPIDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNM QILLVFLHCLRKQKLEELNEIQTDLQYIKEDISSVERHRAELYRTKERYSMKLRMLLDEP TAQKMWPSSIDKASCRFLPNSRTPLSGSCPGTLQNKKLDLKAQVSHQGFQRRDALTSSDP PNSPIQSGNVIARKRRVQAQFNELQEYYLQRRRTGAQARRQEERDIVAMNREGYHAGLQD FQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSKRIKVFEFST VVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEH EKRAWSVDFSRTDSSMLVSGSDDCKVKVWCTNQEASVINIDMKANICSVKYNPGSSFYVA VGSADHHIHYFDLRNPSSPVHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNCP VRTFRGHKNEKNFVGLSVNNEYIACGSETNEVFVYHKAISKPAASHRFVSSDPDDADDDP GSYFISAVCWKSDSPTMLTANSQGTIKVLVLAP NT seq 2082 nt NT seq  +upstreamnt  +downstreamnt atgggcgactcctcggtggccggcgcgctcgtgccgtccgtgcccaagccggagcccgcg ccgtccggtgacacctccgcggcggccgcggcgactacagcggcgctggcgatgccggag gaggcgggtatgcgcgcggcgtcggcgtcgcctcaggggcctgcggaggagggggagggc cccgccgatagggaccttctctgcccgatctgcatggccgtcatcaaggacgccttcctc accgcatgcggccacagcttctgctacatgtgcatcgtcacgcatctcagcaacaagagc gactgcccctgctgcggccactaccttaccaaggcccagctctaccccaactttctcctt gacaaggttctgaagaaaatatcagcccaacaaatagcaaaaacagcatcgccaatcgat caatttcgatgtgcattgcaacagggaaatgaaatgggggttaaagagttggatagcctt atgactttgattgctgagaagaagcggcaaatggaacaacaagaatcagagacaaatatg caaatattgctagtcttcttacactgccttagaaagcaaaagctagaagagttgaatgag attcaaactgatctacaatacatcaaagaggatataagttctgtggagagacatagggca gaattatatcgcacaaaagaaaggtactccatgaagctgcgcatgcttttagatgagcct actgcacaaaaaatgtggccctcttctatagacaaagctagctgtcgctttcttcccaac tctcggacaccacttagtggatcatgtccaggaactttacagaataagaagcttgatttg aaagctcaagtaagccatcaaggatttcaaaggagagatgctctaacttcttctgatcct cctaactcccctatacaatcgggtaatgttattgctaggaagaggcgagttcaagcacag ttcaatgagcttcaagaatactacctgcaaagacgtcgtactggagcacaggcacgcaga caggaagaaagagatatagttgcaatgaatagagaaggctatcatgcaggtcttcaggat ttccagtctgtgctaacaacgttcactcgatacagtcgtctacgtgtcattgcggaacta agacatggagacttgtttcactctgccaatattgtatccagtattgaatttgatcgtgat gatgaactatttgctaccgctggagtctcgaaacgtattaaagtcttcgaattttccact gttgttaatgaaccatcagatgtgcattgcccagttgttgaaatggctaccagatctaaa cttagctgcctaagctggaacaagtactcaaaaaatattattgcaagcagtgactatgag ggtatagtaactgtgtgggatgttcagacccgtcagagtgtgatggaatatgaagagcat gagaagagagcatggagtgttgatttttctcgcacagactcttcaatgctagtatctggg agtgatgattgcaaggtgaaagtgtggtgcacaaatcaagaagcaagtgtgatcaatatt gatatgaaagcaaatatttgctcggttaaatataatcctggatcaagcttctacgttgca gtcggatctgctgatcaccatattcattactttgatttacgtaatccaagttcgcctgtc catattttcggggggcacaagaaagcagtatcgtatgtgaaattcttatctaacaatgag cttgcgtctgcgtcaacagatagcacattacgcttatgggatgtcaaggataactgcccg gtacggacattcagagggcacaaaaatgaaaagaactttgttggcttgtctgtgaacaat gaatatattgcttgtggaagtgagacaaatgaggtttttgtttatcacaaggctatctcg aaaccggcagcaagccatagatttgtatcttctgacccggatgatgccgatgatgatcct ggttcttatttcattagtgctgtctgctggaagagtgatagccctacgatgttgactgct aacagtcaggggaccataaaagttcttgtacttgctccttga

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