KEGG   Zea mays (maize): 100286213
Entry
100286213         CDS       T01088                                 
Name
(RefSeq) SAD1
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100286213
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100286213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100286213
   03041 Spliceosome [BR:zma03041]
    100286213
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100286213
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100286213
Spliceosome [BR:zma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100286213
SSDB
Motif
Pfam: LSM DUF7452
Other DBs
NCBI-GeneID: 100286213
NCBI-ProteinID: NP_001152573
UniProt: A0A9F2ICJ6 B4FLA3
LinkDB
Position
6:complement(154440209..154443551)
AA seq 88 aa
MSQNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEG
RRITKLDQILLNGNNIAILVPGGSPPDV
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtctcagaacaacccctcccagctcctcccctcagagctgatcgatcggtgcatcggg
tccaagatctgggtgatcatgaagggggacaaggagctcgttggcaccctctgcggcttt
gatgtctacgtcaatatggtgctggaggacgtcaccgagtatgaatacactgctgaaggg
cgccgcattacaaaacttgaccagatcctcctaaacggcaacaacatagccattttggtt
cctggtggttcaccacccgatgtgtaa

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