Zea mays (maize): 100286213
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Entry
100286213 CDS
T01088
Name
(RefSeq) SAD1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100286213
09123 Folding, sorting and degradation
03018 RNA degradation
100286213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100286213
03041 Spliceosome [BR:
zma03041
]
100286213
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100286213
mRNA degradation factors
5'-3' decay
Lsm complex
100286213
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100286213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7452
Motif
Other DBs
NCBI-GeneID:
100286213
NCBI-ProteinID:
NP_001152573
UniProt:
A0A9F2ICJ6
B4FLA3
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All DBs
Position
6:complement(154440209..154443551)
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AA seq
88 aa
AA seq
DB search
MSQNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEYEYTAEG
RRITKLDQILLNGNNIAILVPGGSPPDV
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaacaacccctcccagctcctcccctcagagctgatcgatcggtgcatcggg
tccaagatctgggtgatcatgaagggggacaaggagctcgttggcaccctctgcggcttt
gatgtctacgtcaatatggtgctggaggacgtcaccgagtatgaatacactgctgaaggg
cgccgcattacaaaacttgaccagatcctcctaaacggcaacaacatagccattttggtt
cctggtggttcaccacccgatgtgtaa
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