Zea mays (maize): 100304345
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Entry
100304345 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100304345
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
zma
Zea mays (maize)
Pathway
zma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100304345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100304345
Membrane trafficking [BR:
zma04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
100304345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Beta-prop_EML_2
WD40_CDC20-Fz
Clathrin
WD40_WDHD1_1st
WD40
WD40_Prp19
EIF3I
WDR55
zf_RING_Vps8
PROPPIN
WDR90_beta-prop_4th
Beta-prop_HPS5
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR11_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Pox_Ag35
TPR_7
Beta-prop_TEP1_2nd
TPR_14
Motif
Other DBs
NCBI-GeneID:
100304345
NCBI-ProteinID:
NP_001334065
UniProt:
C0HF00
A0A1D6DTP0
LinkDB
All DBs
Position
2:2314401..2320673
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AA seq
954 aa
AA seq
DB search
MSTAPARRARPPLPLQNGAEGDDEREEEVDEEEVGDDEAEEEEDDDDEEEPRLKYQRLGG
SVPAILSTDAAAAIAVADRMVALGTHNGTLHILDFQGNQVKEIAAHTATINDISFDADGE
YIGSCSDDGTVAINSLFTDEKLKFEYHRPMKAIALDPNYARNYRRFATGGLAGQVLVLTK
KSWGGYHKKVLRDGEGPIHSMKWRADLLAWANDAGVKVHDMRTDKGIAFIERPKGIHRPE
FLLPHLVWQDDTVLVVGWGTSVKIAAIRTDLSQGLNGLQRTITTASSEKYVDIVGSFQTG
YHISGVAPFGDLLVVLAYIPDEDEKEKTFSTSVTSRQGTAQRPEIHLVSWKNDELTTDAL
PIHGYEHYKAKDYALAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDAEDHIAW
LLQHGCHEKALAAVEAGQGRTELLDEVGSRYLDHLIIERKYAEAAQRCPKLLRGSPSAWE
RWVFHFAHLRQLPVLVPYIPTENPQLSDTAYEVALVALTTNPSFHELLLTTIKNWPPTLY
SASPVISAIEPQLNSSSMADSLKESLAELYVINGQYEKALSLYAELLKPEVFEFIEKYNL
HDAIHDKIVNLMIVDNKRTVHLLIQHRDIIPPYEVVEQLLHTSKKCDKRYLLHLYLHALF
EIDIHAGKDFHDMQVELYADYETRMLLPFLRTSQHYRLDKAYEIFAQKELVREQVFVLGR
MGNAKEALSTIINKLEDMQEAVEFVTEQHDDELWEELIRQCLQKPEMVGNLLEHTVGNLD
PLYIVSLVPDGLEIPRLRDRLVKIVTDYRTETSLRNGCNDILKADCVNLLVKYYHEARRG
VYMVSMDEEVHGNRADDGSSRGHERSSSVRALDIKSRTRCGARCCLCFDPLPIQDISVIV
FYCCHAYHLSCLEGGLDSMRSNSGQDSDGGMDDEDGSPSGQSRMRCVLCTTAAS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcgcccgcgcggcgcgcccgcccgccgctgccgctgcagaacggcgcggag
ggcgacgacgagcgcgaggaggaggttgatgaggaggaagtgggcgatgacgaagcggag
gaggaggaggacgacgacgacgaggaggagccgcggctcaagtaccagcggctaggcggg
agcgtgccggcgatcctctccaccgacgccgcggccgccatcgccgtcgccgaccgcatg
gtcgcgctcggcactcacaacggcacgctccacatcctcgacttccagggcaaccaggtg
aaagaaattgctgcgcacacagcaactatcaacgacataagctttgacgcagacggtgaa
tatataggcagctgctcggatgatggcacagtggcaataaacagcctcttcaccgatgaa
aagctaaagtttgagtaccatcgccccatgaaggcaattgctctagaccctaattatgcc
cggaactatagaagatttgctactggtggtttagcaggccaagtacttgtgctgacaaag
aagtcttggggaggttaccataagaaggttttgcgtgatggtgaagggccaatccattcg
atgaagtggagggcggatcttcttgcttgggctaatgatgcaggggtcaaagtgcatgat
atgagaacagacaaagggatcgcattcatagagagaccaaaaggcattcatcgaccagag
ttcttgcttccccacctagtctggcaggatgatacagtcttagttgttggatggggaaca
agtgtcaagattgcagcgatccgaacagatctatctcagggactcaatggcctacaaaga
actatcaccacagctagttctgagaagtatgtggacattgtgggctcattccaaacaggc
tatcacatatctggggttgctccatttggtgaccttttagtcgtacttgcctatattcct
gatgaggatgaaaaagagaaaacatttagtacttctgttacttcacgacagggaactgca
cagcgtccagaaatacatcttgtatcatggaaaaatgatgagcttactacagatgctctg
cctattcatggttatgagcattacaaggcaaaggactatgctcttgcacatgcacctttc
tcaggaagtagcaatgcaggtggacagtgggctgctggtgatgaacctttgtattacatt
gtgtctcctaaggacatagtcgttgcaaagccaagagatgctgaagatcatattgcttgg
cttcttcaacatggttgccatgaaaaagcattggctgcagttgaggcagggcaaggacgc
actgagcttcttgatgaggtgggctcaagataccttgatcacttgataattgaaagaaaa
tatgctgaagctgctcaacgctgcccaaagttgttgcgaggatccccttcagcatgggag
agatgggtcttccactttgctcatctccgccaacttcctgttttggtcccttatattcct
acagaaaatcctcagctgagtgatactgcatatgaggttgcccttgttgctctaactacc
aatccttctttccatgaacttctcttgactactataaaaaattggccaccgacattatac
tcagcctcaccggtcatatctgccattgagccacagctaaactcctcatcgatggctgat
tcattgaaagagtcattagctgaattgtatgtgatcaatggtcaatacgaaaaggcactt
tctctttatgctgaactcctgaagccagaagtattcgagtttattgagaaatacaacttg
catgatgccattcatgataagattgtcaatcttatgatagtggacaataaaagaacagtt
cacctactgatccaacatcgtgatatcattcccccatatgaagttgtggagcagctgttg
cataccagtaaaaaatgtgacaagagatatttgttacacctgtatttgcatgctttattt
gagatagatatacacgctggaaaggattttcatgatatgcaggtggagctttatgctgac
tacgagacaaggatgctactacccttccttcgaaccagtcagcattacaggcttgacaag
gcatatgaaatctttgcacaaaaagaacttgtaagggagcaagtttttgtccttggtcga
atgggcaatgctaaggaagctctgtcgacaattataaacaaactggaagacatgcaggag
gctgttgaatttgttacggaacagcatgatgatgaactgtgggaggaactgattagacaa
tgcctccagaagcctgaaatggtagggaatctattggaacatacagttggcaatcttgat
cctctgtacattgtcagtttggttcctgatggcttagaaatacctcggttgcgggatcgt
cttgtgaaaattgtgacggattaccggacagaaacttcattgcgaaatggatgcaacgat
atacttaaggctgactgtgttaaccttttggttaaatactaccacgaggctcggcgtggg
gtatacatggtaagcatggacgaggaggtacacggaaacagagctgacgatggatcatcg
cggggacacgagagatcatctagcgtccgggctctagatatcaagtccagaacaagatgt
ggtgcccggtgttgtttgtgcttcgatcctttgcctatccaggacatatctgtcatcgtg
ttctactgctgccatgcgtatcatctgtcttgccttgaaggtggcttagactcgatgaga
tcaaacagtggtcaggatagtgacggaggcatggacgatgaggatggttccccatcaggc
cagtctcgcatgcgctgtgtcttgtgcactactgctgcttcataa
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