Zea mays (maize): 100381399
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Entry
100381399 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381399
KO
K13111
WD40 repeat-containing protein SMU1
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100381399
Spliceosome [BR:
zma03041
]
Complex B
Other components
Complex B specific factors
100381399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Ge1_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
DUF7165
WD40_RFWD3
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_IFT122_2nd
zf_topless
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100381399
NCBI-ProteinID:
NP_001167711
UniProt:
C0HFQ9
LinkDB
All DBs
Position
3:complement(58813719..58830667)
Genome browser
AA seq
429 aa
AA seq
DB search
MAELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQESTKEKRRAL
IAQAVASEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDEEETYPTS
LSHQIKFGKKTHPECARFSPDGQYLVSCSVDGIIEVWDYLSGKLKKDLQYQADESFMMHE
EPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSKGVTSVTFSRDGTQILS
TSFDTTARVHGLKSGKMLKEFRGHSSYVNYAIFTTDGSRVITASSDCTVKVWDTKTTDCL
HTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKTSSIFIMTLQGQVVKSFSSGKREGGD
FVAASVSPKGEWIYCVGEDMNMYCFSYQSGKLEHLMKVHEKDVIGITHHPHRNLVATIAE
DCMMKIWKP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctccgtgagcttgacacggcccgtgccatcctccgtcagacgcaggtcatg
ggtgttatgaagcaggagcagcctgagcggtacctccgccttgagcacctccttgtccgc
acatactttgaccccaatgaggcctaccaagaatccaccaaggagaagcggcgagcactg
attgctcaagctgttgcttcagaagtctcagtagtaccgccatctcgtcttatggcactg
attggtcaggctttgaagtggcaacagcaccaaggattgttgcctcctggcacacagttt
gatttatttagaggaactgctgcaatgaagcaggatgaagaagaaacataccctacttcc
ttatctcatcaaataaagtttgggaagaaaactcatcctgaatgtgctcgattttcacct
gatggtcagtaccttgtttcatgctcagttgatggaataattgaagtctgggattatctt
agtggaaagcttaaaaaggatcttcaatatcaagccgatgaaagctttatgatgcacgag
gaacctgtgctgtgtgttgattttagtagggattctgaaatgctggcatctggatcacag
gatggaaagattaaggtttggcgtatacgaactggtcagtgcttgcgacgccttgagcgt
gcacattcgaaaggtgttacaagtgttacattttcacgtgatggaacccaaatattgagt
acatcctttgacactaccgcgagggtacatggcctcaagtctggaaagatgctgaaagaa
tttcgaggtcattcttcatatgtaaattatgccatcttcactactgacggtagccgtgtc
attacagcttccagtgattgtactgttaaggtctgggatactaaaacaacagattgcttg
catactttcaagccaccacctcctttgaggggaggagatgcatctgttaattctgtccat
ttatttccaaaaaatactgatcacattgttgtctgcaataagacttcatcaatattcatc
atgactttacaaggacaggttgtgaagagtttctcatcaggtaagcgagaagggggagat
tttgttgcagcttcagtttcaccaaaaggagaatggatatattgtgttggtgaagacatg
aacatgtattgctttagctaccaatctggtaaactggagcatctgatgaaggtgcatgag
aaggatgtcataggcattacgcaccatcctcacaggaacttagtagccaccattgctgag
gattgtatgatgaagatatggaagccttga
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