Zea mays (maize): 100381417
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Entry
100381417 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381417
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
100381417
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100381417
microRNA pathway
RISC loading complex
100381417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
dsrm
DND1_DSRM
Helicase_C
DEAD
ResIII
Dicer_PBD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100381417
NCBI-ProteinID:
NP_001335948
LinkDB
All DBs
Position
1:complement(4676481..4690055)
Genome browser
AA seq
1798 aa
AA seq
DB search
MAGGPGGGGDAGGEHAAAAYWYDACEDSASLLCGIDFAASADFDPGLIPAMDCGADDGFV
AEIDRILESINAEATPAPPPPPPAPAPAPAPAPVAPLQPQPQLQEAAATVAHNAVAVSDV
AQRAPAVEARKEPRREFPVAAANGGDDCRDSKRQRLPAGGTGGPRHDWRRRPMAPPPPSR
GWEDRGRGRREYDRPRKRDRDGHYGQCHDHHRRDPRGFWERDRGGKMVFRHGMWEAEADR
QGKRARTKDGCPPAENKAEVDRSGKEKPATEEKARQYQLEVLEQAKSRNTIAFLETGAGK
TLIAVLLIKSICDKMLKENKKILAVFLVPKVPLVYQQAEVIRERTGYRVGHYCGEMGQDF
WDSRKWQREFESKQVKSCAWPYFYFQTIFRYNAPWPSFDQTYELRLVYGVSERTESDGAA
NLIQKLRAINYALGELGQWCAYKVALSFLTALQNDERANYQVDVKFQESYLRKVVDLLHC
QLTEGAAMKSDSNDVEMHNSENPKPNELEEGELPDSHAVSVGEHVDEVIGAAVADGKVTP
RVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVFAELPSLGFIRCASLIGHNNNQEM
RSCQMQDTITKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP
GSDYILMLERGNMSHEAFLRNARNSEETLRKEAIERTDLSHLDGTSMLSPVDISPDSMYQ
VESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMQKHEKPGGSTEYSCKLQLPCNA
PFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDRGSGEGEKTEQNDEGDPLP
GTARHREFFPEGVAEILHGEWILSGRDGYQSSQFIKLYLYSVNCVNIGTSKDPFVTQLSN
FALIFGNELDAEVLSTTMDLFVARTIITKASLVFRGPIEITESQLILLKSFHVRLMSIVL
DVDVDPSTTPWDPAKAYLFVPVGAEKCMDLLREIDWTLVNSIVNSDAWNNPLQRARPDVY
LGTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDVVKASGLVPGRGWGHF
NDYQNKGKLFMADSCWDAKDLAGMVVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPL
EYSSFADYYKQKYGVELVYKKQPLIRARGVSYCKNLLSPRFEHSEASNGEFSENLDKTYY
VYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDIIGYPVPANKILEALTAA
SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMILYQYALNKN
LQSYIQADRFAPSRWAAPGVLPVFDEETRDSEPSIFDEEFTPSSELQKNLYDDYDGDSMQ
EDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVAGGKIATNHLMKWIGINAELDPQEIPS
SKPYNIPESIIKSINFDTLEGALGIKFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAV
LDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIRE
FVKDVQEELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCATSVVWKVFQPLLDP
MVTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQ
KLAARNALVVLKEKETAAKKDTEKDGEKKNGSQFTRQTLNDICLRRQWPMPQYRCINEGG
PAHAKRFVYAVRVNTSDSGWTDECIGEPMPSVKKAKDSAAVLLLELLNRNYRGKPDGK
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagggccaggaggaggcggcgacgccggcggcgagcacgcggcggcggcgtac
tggtacgacgcgtgcgaggacagcgcctccctgctctgcggcatcgacttcgccgcgtcc
gccgacttcgacccgggcctcataccggccatggactgcggcgccgatgacggcttcgtc
gccgagatcgaccggatactcgagagcatcaacgccgaggccacccccgcaccgccgcct
cctcctcctgcgcctgcgcctgcgccagcgccagcgcctgtggctccgctgcagccacag
ccgcagttgcaggaggcggctgcgaccgtggcccacaatgcggtggcggtgtcggacgtg
gcgcagagggccccggccgtggaagcgaggaaggagcccaggagggagttcccggtcgcc
gcggccaatggcggcgacgactgcagggacagcaagcgccagcgtctccctgcgggtggt
accgggggaccacgccacgactggcggcggcgtccgatggcgcccccgcctccatcccgt
gggtgggaggaccgggggcgcggaaggcgggagtacgacaggcctcgtaagcgcgaccgc
gacggccactacggccaatgccatgatcaccaccgacgcgaccctcggggtttctgggag
cgcgaccgcggcggcaagatggtgttccgccatggcatgtgggaggctgaggcggaccgc
cagggaaagcgtgccaggacgaaggatggatgccctcctgcggagaataaggcggaggtg
gatcggtcggggaaggagaagcctgccactgaggagaaggcgaggcagtaccagctcgag
gtgcttgagcaagcaaagagcaggaacacaattgctttccttgaaactggtgcggggaag
actctcatagctgtgttgctcatcaaaagcatctgtgacaaaatgctcaaggagaacaag
aagatccttgctgtcttcttggtgcctaaggtgccccttgtgtatcagcaagctgaagtg
atacgcgagaggaccggctatcgtgttgggcactactgcggggagatggggcaggatttc
tgggattctagaaagtggcagcgcgagtttgagtcaaaacaggtaaaatcctgtgcgtgg
ccgtacttttacttccaaactattttcagatacaatgccccatggccaagctttgatcaa
acctatgagctacgtcttgtctatggtgtttctgagcgtacagaaagcgatggtgcagct
aatttaattcagaagttgagagctataaactatgctctgggtgaactaggacagtggtgt
gcttacaaggttgcactgtcattcttgacagcactacagaatgatgaaagggccaactat
caggttgatgttaagtttcaagagtcatacttgagaaaggtagttgatttgttacactgc
cagttgactgaaggggctgcaatgaaaagtgacagtaatgatgttgaaatgcataattct
gaaaaccccaagccaaatgaacttgaggagggagagctacctgacagtcatgctgtttct
gtaggtgaacatgtagatgaagtcattggtgccgcagtggccgatggaaaagttacccca
agggtgcaagctttgataaaaatacttctcaagtatcagcacactgaggattttcgtgct
atcatatttgtagagcgagtggttacagcattagtcctccctaaggtctttgcagaactt
ccatcgttgggctttatacggtgtgcaagcttgataggtcataacaataaccaggagatg
cggtcgtgccaaatgcaggatacaatcacaaaatttcgtgatggccgtgttacactgtta
gttgcaactagtgttgcagaggaaggacttgatattaggcagtgcaatgttgtcattcgc
tttgaccttgcaaagactgttttggcctacattcagtctcggggtcgtgctagaaagcct
ggatctgactacatattgatgcttgaaagaggaaatatgtctcatgaagctttcttgaga
aatgctcggaatagtgaagagacattgagaaaagaagctattgagagaactgatctcagt
catctcgatggcacttctatgctaagccctgttgatatatcacctgattctatgtatcag
gttgaatcaacaggtgccgttgtcagtctgaactctgcagttggactcgtacatttttac
tgctcacagctgccgagtgacagatactctattcttcgaccggaatttattatgcaaaag
catgagaaaccagggggttcaacagaatattcttgcaaacttcaactcccttgtaatgcc
ccattcgagaaacttgaaggtcctatatgcagttcaatacgcctggcccaacaagctgtt
tgtttagctgcttgtaagaagctacatgagatgggtgccttcacagatatgcttttacct
gacagaggaagtggggaaggagaaaagactgaacaaaatgatgaaggtgatccactgcct
ggaacagcacgccatagagagttctttcctgaaggggttgctgaaattctacatggagaa
tggattttatctggaagagatggttaccaaagttcacagtttattaagttatatttgtat
tctgtgaactgtgtaaacattgggacttcaaaggaccctttcgttacacaactttcaaat
tttgctcttatttttggcaatgagctggatgcagaggttttatcgacgacgatggatctc
tttgttgctaggacaataataacaaaggcatctctcgtattccgtggaccaattgaaatt
acagaaagtcagctgatcctgcttaagagctttcatgttaggctcatgagcattgtactt
gatgttgatgttgatccctcaacaactccttgggatccagcaaaagcatacctctttgtt
cctgtgggagctgagaaatgtatggatcttttaagagagatagattggactctagttaat
agcattgtgaattctgatgcctggaacaaccctcttcagagggcacgcccagatgtctat
ctaggcacgaacgaaaggacacttggaggggataggagggaatatgggttcgggaagttg
cgccatggaactgcatttggacagaaagcccaccctacgtatggtatcagaggagccatc
gctgaattcgatgttgtcaaagcgtctggattagttcctggtcgtggatggggacatttt
aatgattatcaaaataaaggcaagttgttcatggcagattcatgttgggatgccaaagat
cttgctggaatggttgtaactgccgcccactcaggaaaaaggttctatgtggacagtatt
tgctataatatgaatgcagaaaattctttccctaggaaagagggctatctgggtcccttg
gaatacagctcgtttgctgattactacaagcagaagtatggtgtggagttagtttataag
aaacaacctcttatacgggcacgcggtgtttcatactgcaaaaatctactttctcctaga
tttgagcattctgaagctagcaatggagagttctcagagaatcttgacaagacatactat
gtatatttaccacccgaattgtgccttgtgcatcctctccccggatcacttgttcgtgga
gctcagaggttaccctcaataatgagaagggtggagagcatgcttcttgcaattcaactg
aaggacataattgggtatccagttcctgcaaataagatattagaagccttgactgctgcg
tcatgccaggagacattctgctatgaaagagcagagctgctgggtgatgcatacttgaaa
tgggttgtgagtagattccttttcctaaaatatcctcaaaagcatgagggacagctcaca
aggatgcggcagcagatggttagcaacatgatcctgtatcaatacgccctgaataaaaac
ctccaatcttatatccaagcagatcgatttgctccatcaagatgggcagctccaggagtg
ttacctgtatttgatgaagaaacgagagattctgaaccatccatctttgatgaggaattt
actcctagcagtgagttacaaaagaacttgtatgatgactatgatggcgatagcatgcaa
gaagacggtgaaattgagggagattctagctgctatcgtgttctatcaagcaaaacatta
gcagatgttgtggaagcacttattggtgtctattatgtagctggagggaaaattgctaca
aaccatctgatgaaatggatcggtattaatgcagagttggatcctcaagagatcccatct
tcgaagccatataacatacctgagagcataattaaaagcatcaattttgacacattagag
ggtgcattgggtatcaagtttcagaataaaggcttacttgttgaagctataacacatgca
tcaagaccatcatcaggtgtttcctgttaccagcgcctggaatttgttggtgatgctgta
ttggaccatctcattacgaagcacttattttttacttatacggacctacctccaggccgc
ttgactgacttgagagctgcagctgttaataatgagaactttgcaagggttgcagttaaa
cataagctacatgtacatcttcgccatggatcatctgcattggagacacagattcgagag
tttgtgaaggatgtccaggaggagctttcgaaaccaggtttcaattcttttggccttggg
gattgtaaggctccaaaggttctcggagacatttttgagtctattgctggcgcaatattc
cttgatagtgggtgtgctacctccgtagtctggaaggtttttcagcctctgcttgatcca
atggtgacgccggacacccttccgatgcaccctgtaagggagctccaagagcgctgccag
cagcaagccgaaggattagaatacaaagcatcccgtacaggcaatgtagctacagttgaa
gtcttggttgatggcatacagattggtgtagctcagaacccacagaagaagatggcacaa
aagttggcggctagaaatgcacttgttgtcttgaaagagaaggaaaccgcagcaaagaaa
gacactgaaaaggatggcgagaagaaaaacggttctcagttcactaggcagactctgaac
gacatctgcttgagaaggcaatggccgatgccacagtacaggtgtataaacgagggtggc
cctgcccatgccaaaagatttgtttatgcggtaagggtaaatacatctgacagtggatgg
actgacgagtgcattggagagccaatgccgagtgtgaaaaaggccaaggactctgcagct
gttcttctgctcgagctgctgaatcgaaattaccgtggcaagcctgatggaaaataa
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integrated database retrieval system
