Zea mays (maize): 100381531
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Entry
100381531 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381531
KO
K13126
polyadenylate-binding protein
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100381531
09123 Folding, sorting and degradation
03018 RNA degradation
100381531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100381531
03041 Spliceosome [BR:
zma03041
]
100381531
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100381531
mRNA cycle factors
Stress granule specific factors
100381531
Spliceosome [BR:
zma03041
]
Complex C
Other components
Complex C specific factors
100381531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_10
RRM_RdRP1_2
RRM_7
BRAP2
Motif
Other DBs
NCBI-GeneID:
100381531
NCBI-ProteinID:
NP_001307816
UniProt:
A0A1D6I0G1
C0HGT6
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All DBs
Position
7:complement(67547451..67553429)
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AA seq
656 aa
AA seq
DB search
MAAQGQAAAGSASESGGSPAASAAAAAAAAFPATSLYVGDLHESVQDAQLFDVFSQVGGV
VSVRVCRDINSRKSLGYAYVNYNNTSDAARALELLNFTPINGKPIRIMYSNRDPSSRKSG
AGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEMDESAQSAID
KLNGMLINDKKVYVGPFVRKQDRENVSNNIKFSNVYVKNLSDTVTDDELKEMFGKYGTIT
SAVVMRDSDGNSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREMELKE
KFEKNIQEVAEKFQNTNLYLKNLDDNIDDEKLREIFAEYGNITSCKVMRDSYGVSRGSGF
VSFKSAEDANRALTEMNGKMVGSKPLYVALAQRKDDRKAKLQAQFSQMRPVAMAPSVGPR
MPMFPPSVPGVGQQLFYGQPPPAFINPQAGFAFQQPMMPGMRPGGPMPNFMMPMVQQGQQ
PQRPAGRRAGSGGMQQPMPMGSQQQIFPRGGRGYRYATGRGMPDPGMHNVGAVMPSPYEM
GGMAMRDAGVSQPVPIGALATALANASPDQQRLMLGENLYPLVEQLEREQAAKVTGMLLE
MDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNASTEQQLANLSLNDGVLSS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaagggcaggcggcggctggatccgcgtccgagtctggcggctcaccggct
gcctcagctgctgcagcggcggcggctgcgttcccggcgacttctctctacgtgggtgac
ctgcacgagagcgttcaggacgcacagctcttcgacgtcttcagccaggtcggcggcgtc
gtctccgtgcgcgtctgcagagacatcaactcccgcaagtcgctcggctacgcctacgtc
aactacaacaacactagcgacgctgcacgggcacttgaactgcttaacttcactcctatc
aatggaaagcctatcaggatcatgtattctaaccgtgaccccagctcgcgcaaaagcggt
gcaggaaatatatttattaagaatcttgataagtcaatagacaacaaagctttatatgac
acgttctgtgcatttgggaatatcctttcatgtaaaattgcaacagacccctcaggagaa
tcaaggggatatggttttgttcagtttgagatggatgaatccgctcagtctgccattgat
aaactcaatggtatgcttatcaatgacaagaaagtgtatgttggaccttttgttcgtaag
caggacagggaaaatgtctcgaacaatatcaaattcagtaatgtgtatgtgaagaatctg
tccgatactgttactgatgatgagttgaaggagatgtttggaaaatatggaaccataaca
agtgctgttgttatgcgggatagtgatggaaattctaggtgttttggatttgtcaatttt
gaaaatgcagatgctgctgctcaggctgttcaagagttgaatggcaagatattcaatgat
aaggaactgtatgttggaagagcacaaaagaagtctgaaagagagatggagttgaaggag
aaatttgaaaagaatattcaagaggtagctgagaagttccaaaacactaacttgtatctg
aagaacttagatgataacattgatgatgaaaagttgcgtgaaatctttgctgagtatggc
aatattacttcttgcaaggttatgcgggattcttatggtgttagcagagggtctggattt
gtttctttcaaatctgctgaagatgctaaccgagctcttaccgagatgaatggcaaaatg
gttggaagcaagcccctttatgtagctcttgcacagcgtaaagatgacagaaaggcaaag
ctacaggcacagttttcacaaatgcgtcctgttgcaatggcaccttcagtaggtcctcgc
atgcccatgtttccacctagtgttcctggagttggtcagcagctgttttatggtcagcca
cctccagccttcatcaaccctcaggctggatttgctttccagcaacctatgatgcctggt
atgaggcctggtggtccaatgccgaactttatgatgcctatggttcagcagggacagcaa
ccgcaacgtcctgctggtaggcgtgctgggtctggtggaatgcagcagcccatgccaatg
ggtagtcagcaacagatattccctagaggtggtcgtggctaccgctatgctactggacgt
ggaatgcctgatcctggcatgcataatgttggtgctgtgatgccatctccatatgagatg
ggagggatggcaatgagagatgctggtgtctcacaacctgttccaattggggcactagcc
actgcgcttgctaacgcctcaccagatcagcaaagactgatgcttggtgagaacctgtat
cctcttgttgaacagctggagcgtgagcaggctgccaaggtcactggcatgcttttggag
atggaccagacggaggttcttcacctgctggagtcgccagatgctctcaaggctaaggtt
gctgaagccatggaggttctccgctcagcccagcatctccagcagagcaatgcctccacc
gagcagcagctggctaatctatcactgaatgatggcgtcctctccagctga
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