Zea mays (maize): 100381583
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Entry
100381583 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381583
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100381583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100381583
03009 Ribosome biogenesis [BR:
zma03009
]
100381583
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100381583
Spliceosome [BR:
zma03041
]
Complex A
U1 snRNP components
U1 related factors
100381583
Complex B
100381583
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-60S particles
Helicases
100381583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100381583
NCBI-ProteinID:
NP_001335955
UniProt:
A0A1D6F8C9
LinkDB
All DBs
Position
2:237548669..237555383
Genome browser
AA seq
1353 aa
AA seq
DB search
MAAQEAAAADSLGPRFAPDDPTLPAPWKGLIDGATLYYWNPETNVTQYEKPAATAGVPPL
SAGLPPATPAQVPESAPVAFPQLNVQFGQAGQAGHQERPDQAAYPQAGQLGQQHTQQPAQ
QQPFQQQQPFQQHVQAQHQASFQHVPYQQQQTHMPNQPHQYHSTHPQHMPYQHGLYMQPQ
QQQQAPPYSYQADQQPQMRQTAYNQAQQPSVPQAAYNQSQSQQPPMPQSSYDQGQSQQPP
MPQPSYNQGQVQQPPMPQPSYNQGQQSMIPQSAYNQAQQPQIPHGAYNQSQQPLGDRIPQ
GQGQHPQQSLSSHHPAQASQSPQVSQPQGPKMPTQQGQLQHGLPFTQHGKTPLSHGQQSP
LLKDDDGGVHEGKRTGFPLPLSQQRGQAPLPNQQLPSTHQHPGALSSQPNIPGVGGPFYP
ARNLPDGPSSAETNNMGFMNSPAQMHQGGADTNYQKKPVSGHTVPNHVGPSPIRPPMGFD
MGNSVGHFERDDPHSYGRFDGAKALQQQPKLAALPTSQNSMVMHNGPLYPRPDNFGGHNM
APPHSVPNPYNLGPLPIGTSVRPPSSMFAPPDFPSVSSADAYRQHHEVTAMGENVPAPFM
TFEATGFPPEILREIHAAGFSNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFI
HLRRCHNNPMLGPTVLVLAPTRELASQIQAEVVKFGQSSRVSCTCLYGGTSKVPQLRELE
RGADIVVATPGRLNDILEMKRINLHQVSLLVLDEADRMLDMGFEPQIRKIVDELPNARQT
LMYTATWPKEVTKIAGDLLRDPVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILG
DQERGSKIIIFCSTKKMCDQLARGIGRNFNAVSIHGDKSQAERDNVLNQFRTGRASVLVA
TDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYACDLV
KLLQGANQLVPPQLQDMAARSASGGPRNQASGMSRWDGPGGRGFEPGVGGPVGYGGVREG
PGGFGGREGPGGLGVRESPAMFGGPGGFGDREGPGGFSGHEGHGGFGGREREGPGGFVGR
KGPGGFGGRDGPGSSGFGGRGQRGSGGFGSRGGASPGGFGGRGGRGDSPGFGGRGRGDFS
GFGGRGRGDFSGGRGGRGRGFGGRGRSDRFVSDGRGRYDNRRGFGDKGRDRSYSRSPDRV
RARGYDRRSDSRSISRSRSRSRSWSRSRSRSRSWSRSSSRSHSRSRSRDHGAAPERRPRA
RSGFDVLPPATGAAGPAPVPVPGPAAPPVPAPAPEQSLANTSSMSPMSPGGLVQPAAAPA
GGQPSQGTGAAFPSSPAGETFPGAAAQHPAPDV
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcaggaggccgcggcagctgattctttgggccctcggtttgctccggatgac
ccgacgctccctgcgccttggaaagggctgattgatggcgcgacgctgtactattggaat
cctgagacgaatgtcacccagtatgagaagccggctgcaactgcaggtgtgccccctttg
tcagcaggtcttccgccggcaacccctgcgcaggttccggaatctgcaccagtggctttt
ccgcagcttaacgtgcagtttggacaagctggccaggcagggcaccaggagcgtcctgac
caggcagcttatcctcaggctggccagcttggccagcagcacactcaacagccagctcag
cagcaaccgtttcagcagcagcaaccgtttcagcagcatgtccaggcgcaacaccaagct
tcgtttcagcatgtgccatatcagcaacagcaaacacacatgccaaatcagccacatcaa
taccacagcacgcatcctcaacacatgccgtaccagcatggtctttacatgcaacctcag
cagcaacagcaggctccaccatattcatatcaggcagaccagcagccacagatgcgacaa
actgcttataatcaagctcagcagccatcagtgcctcaagctgcctacaatcaaagtcag
agtcagcagccaccaatgcctcaatcttcctacgatcaaggtcagagtcagcagccacca
atgccgcaaccttcctacaatcaaggtcaagttcagcagccaccgatgccacaaccttct
tacaatcaaggtcagcaatccatgataccacagtctgcctacaatcaagctcagcagcct
caaattccacatggtgcttataatcaaagccagcaaccgctgggagataggattccccag
ggtcaagggcaacatcctcaacaatctttgagctctcatcatcctgcccaagcttcgcag
tcgccgcaagtttcccaacctcaaggacctaaaatgccgactcaacaaggtcaactgcaa
catggattgccgttcactcagcatggaaaaacgccattgtcacatgggcaacaaagtcct
ttgttgaaggatgatgatggaggagttcatgaaggcaagcggactggctttccgttacca
cttagtcagcagcgtggccaagctcctcttccaaatcagcagctaccttctactcatcaa
catcctggagcccttagtagccagccaaatatacctggagtcggtgggccattttatcct
gccaggaatcttcctgatggaccatcctctgctgagactaataacatgggttttatgaac
tcacctgctcaaatgcatcaaggtggagcagatacaaactaccagaaaaaaccagttagt
ggccatacagttccaaatcatgttggtccatcaccaattcgacctccaatggggttcgat
atgggtaatagtgttggacactttgaaagagatgaccctcactcttatggaaggtttgat
ggagcaaaggctctccagcagcagccaaagcttgctgctctcccaacttcacaaaattcc
atggtcatgcataatggaccgctttatcctcggccagacaattttggtggtcataacatg
gcacctccgcattcagtaccaaatccatataatcttggtccattgcctattggaacttca
gtgaggccaccgtcaagtatgtttgctcctccagattttccaagcgtatcttcagctgat
gcataccgtcaacaccatgaagtcactgccatgggtgagaacgttcctgctccgtttatg
acatttgaggccactggattccctccagagattctgagagagatccatgcagctggtttt
tcaaatcccactccaattcaagctcaaacatggcctgttgcgctgcaaaaccgggacata
gtagctattgctaagacagggtctggaaagacgctggggtacctaatccctgcttttata
catctgaggagatgccacaataatccgatgctgggccctacagtattggttttggcccct
actcgcgaacttgcttcacaaatacaagccgaagtagttaagtttggtcaatcatctaga
gtttcttgcacatgcctatatggtggaacttcaaaggtccctcagctaagagaacttgag
cgtggagcagatattgtggtagcaacaccagggcgtcttaatgatatcctggagatgaag
aggattaacctccatcaggtttcattacttgtgcttgatgaagcagaccgcatgcttgac
atggggtttgaaccgcaaatacggaagattgtggatgagcttcctaatgctaggcagact
ctaatgtacactgccacttggccaaaggaggttacaaaaatagctggggatttactgaga
gatcctgtccaggtgaacattggcagtatcgatgaacttgttgctaacaaatccatcact
cagtatgtagaggtggttccacctatggacaagcagcggcgtctagagcagattcttgga
gatcaagaaaggggctcaaaaatcatcatattttgctcaactaagaaaatgtgcgatcag
cttgctcgtggcattggtcgcaactttaatgctgtaagcattcatggtgataaatcacag
gccgaaagagataatgttctcaatcagtttcgaactggcagggcttcagtattagtagcc
acagatgttgctgctcgtggacttgatatcaaagatattagagtggtaatcaattatgac
tttccaactgggatagaggactatgtgcatcgcatagggcgtacaggaagagctggcgct
actggagtctcgtacacatttttctcagaacaagattggaaatatgcttgtgatttggtg
aaactcttgcaaggtgccaaccagcttgtccctccgcagctgcaagacatggctgcacgc
agtgcttctggaggtccaagaaaccaggcttctgggatgagtcgctgggatgggcctggt
ggtcgtggttttgaacctggtgttggtggccctgttggttatggtggtgttagggagggt
cctggaggttttggtggtcgtgagggcccaggtggacttggtgttcgagaaagcccagcc
atgtttggtggccccggtggcttcggtgatcgggaaggccccggtggcttcagtggccat
gagggccatggtggctttggtggccgggaacgggagggtcctggtggctttgttggcaga
aagggcccaggtggttttggtggacgggatggccctgggtcaagtggtttcggtggtaga
ggacagcgtggatctggtggttttggcagtagaggtggagcaagccctgggggctttggt
ggacgtggtggcaggggcgattctcctggttttggtggacgcggcaggggtgatttttcc
ggttttggtggacgaggtaggggagatttttctggtgggcgcggtggcaggggccgtgga
tttggtggcaggggacgttctgaccggtttgtctcagatggacggggacgatatgataac
cgtcgaggatttggagacaagggtagggatcggagctacagccgcagcccggatagagtc
cgggcacggggttatgacagaagaagtgacagcaggagcattagtaggagcaggagtcgc
agcaggagctggtcacgcagcagaagccgcagcaggagctggagccgaagcagcagccgg
agtcacagcaggagcaggagtcgtgaccatggggcagcaccggagcgcaggccccgagca
agatccggcttcgatgtgctgcctcctgcaactggagctgctggacctgcacctgttccc
gtacctggaccagcagcaccgcctgttcctgctccggcacctgaacaatcactggctaat
acatcttcaatgtcaccgatgtctcctggtggcctagtccagccagctgctgcacctgct
ggtggccaaccttcccaagggactggcgctgcattccccagttctcctgcaggcgaaacg
tttccaggcgcagcagctcagcatcccgcgcctgatgtataa
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integrated database retrieval system
