Zea mays (maize): 100381661
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Entry
100381661 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381661
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100381661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100381661
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100381661
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100381661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100381661
NCBI-ProteinID:
NP_001305160
UniProt:
K7V0P9
C0HHV4
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All DBs
Position
4:181521652..181550606
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AA seq
616 aa
AA seq
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MSGLLNSNLNSSASNLSDSAGRPFTASFSGQSGSIPGFHHSGLHNTHGSYNLPSMPGSLA
QRNAAMSGLPSSGVQQPGGSIPGRFPSNNLPVGMPQIPHAHSGVSGRGMNFGAGPAFSSS
MNIGGNIQGLSSGLGSGGNRNSVHGMPVSSSIGNSGQRISSVGNMVSASNIGRNIGTGGL
SVPSIASRINLNGSGGSGSLNVQGSSRMMNGLLHQQATPQLINMLGSSYPTSGGSLSQSQ
IQAGNNSFSSMGMLHDASDTAPFDINDFPQLSGRPSSAGGPQGQYGSLRKQGVGVNTLVQ
QNQEFSIQNEDFPALPGYKGNPSDYNAIELHHKEQLHDNVPVIQAQQYPMARSGLGSSYL
PNRQQHQQGANSVQNGGSHNILLRPPSQTSSLGSYDPFLQQYQQPQPQNHFRLQQMSSAA
HSYRDQIQKIQAGPTPPDPYGLLGFLGVIRMNDADLASLALGIDLTALGLNLNSPDNLYK
TFGSPWSNDPAKGDTDFRIPACYLFDKTPPLQTLLFQRFHIVTLFFVFYSMPKDEAQLYS
ANELYNRGWFYHKEVHLWLTRISNVEPLVKTHLYERGSYYCFDPESWDTIRKDNFVLHYE
MVEKRPVLPSTSPNLR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttgctgaactcaaaccttaatagttcggcatcaaatctttcagactcagct
ggaaggccatttacagcatccttttcgggtcaatctggatcaattccaggttttcatcat
tctggcttgcataacactcatggaagttacaatcttccgagtatgcctggatcacttgca
caaaggaatgctgccatgagtggccttccgtcctctggggttcaacaacctggaggtagc
attcctgggagattcccttcaaacaaccttccagttggcatgcctcagattcctcatgca
cattcaggtgtcagtggtagagggatgaattttggcgcaggtccggcatttagtagcagc
atgaatattggtggtaacatccaaggcttatcctcgggcttgggctccggtggtaatcgc
aattctgttcatgggatgccagtatcttcatctataggaaactcgggtcaacggataagt
tctgtaggaaatatggtaagtgcaagcaatattggaagaaatataggcactggtggtttg
tccgtgccaagtattgcatcacgaatcaatttgaatggtagtggtgggagtggtagtctg
aatgtgcaaggatccagtcgaatgatgaatggattgcttcatcaacaagcaactcctcag
ttgataaatatgcttggaagttcatatccaacatctggaggttcattatcacagagccaa
attcaagcaggaaataattcttttagttctatggggatgttgcatgatgccagtgacact
gctccatttgacataaatgattttccccaattgtctggtcgacctagttctgctggtggt
ccgcaaggacaatatggatcactgcgcaagcaaggagttggtgttaatacccttgtgcaa
caaaaccaggaattcagcattcaaaatgaagacttcccggctttgcctggatataaaggt
aacccttcggattataatgctatagagttgcatcacaaggaacaactccacgataatgta
cctgtaattcaagcacagcagtatcctatggcaaggtcaggcttaggaagtagctaccta
cccaatcgacaacaacaccagcaaggtgctaattcagtccagaatggcggatcccacaat
attttactgagaccacccagtcaaacttctagtttgggatcatatgatccatttctgcag
caataccagcagcctcagcctcaaaatcatttcagattgcagcagatgtcttcagctgca
cattcatatcgggatcagattcaaaagattcaggcgggaccgacaccacctgatccatat
ggcttgttaggatttttgggtgttataaggatgaatgatgctgatttagcatctcttgct
ttaggaatagatttgacagcattgggtttgaacttgaactcgccagataatctatacaag
acatttggctcaccctggtcgaatgacccagcaaaaggagatactgattttcgaattcca
gcttgttacctctttgacaaaactcctccactacagaccttactttttcagaggtttcac
atagtaacactatttttcgtcttctatagcatgccaaaagatgaagctcagctgtactct
gccaatgaactgtataatcggggatggttttaccataaagaagtgcacttatggctcacc
agaatttcaaatgtggaacctctagtaaaaactcacctctatgaacgtggatcttactat
tgctttgacccagaatcctgggacacaatacgcaaggacaactttgttctccactatgag
atggtagagaaaaggccagttctgccttcaacatcaccaaaccttagatga
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