Zea mays (maize): 100381811
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Entry
100381811 CDS
T01088
Name
(RefSeq) phytochromeB2
KO
K12121
phytochrome B
Organism
zma
Zea mays (maize)
Pathway
zma04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100381811
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
PAS_4
HATPase_c
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
100381811
NCBI-ProteinID:
NP_001168077
UniProt:
Q6XFQ2
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Position
9:complement(141022443..141028569)
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AA seq
1166 aa
AA seq
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MASDSRPPKRSPSARRVAPRHAHHHHSQSSGGSTSRAGAGGGGGGAAATESVSKAVAQYN
LDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPLGCTLAVA
DDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPSSAVLLERAFA
AREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVR
AISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAESRRDNLEPYLG
LHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGSTLRAPHGCHAQ
YMANMGSIASLVMAVIISSGGDDERTGRGAISSSMKLWGLVVCHHTSPRCIPFPLRYACE
FLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIITQSPSVMDLVKCDGA
ALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAVALGDAVCGM
AVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLSW
ENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRGINELSSVAREMVRL
IETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKECDDIVEKLLSRA
LRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVCFVGQDVTGQKVVMDK
FINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWSREEVVGKFLIGEVFG
NCCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYVQALLTANTRSKMDGKSIG
AFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSLLQMTDLN
DDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVLEKSEFSLGDVMNAVVSQTMSLLRE
RDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMAQSAPSENGWVEIQVRPNVKQNYD
GTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLMGGEVQYIRES
ERSFFLIVLELPQPRLAAGRENQLIC
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacagtcgcccccccaagcgctccccctccgcgcgacgcgtggcgccgcgt
cacgcgcaccaccaccactcgcagtcgtcgggcgggagcacgtcccgcgcaggcgcggga
ggaggtggcgggggcgctgcggccacggagtcggtctccaaggccgtcgctcagtacaac
ctagacgcgcggctccacgcggtgttcgagcagtcgggcgcgtcgggccgcagcttcgac
tactcccagtcgctgcgcgcgccgcccacgccgtcctccgagcagcagatcgccgcctac
ctctcacgcatccagcgcggcggccacatccagcccttgggctgcacgctcgccgtcgcc
gacgactcctccttccgcctcctcgccttctctgagaacgccgccgacctgctcgacctg
tcgccgcaccactccgttccctcgctcgactccgtggcgctgccccctgtttcccttggt
gccgacgcacgcctctacttctccccctcgtccgcggtcctgctggagcgcgccttcgcc
gcgcgcgagatatcgctgctcaacccgctatggatccactccagggcctcctccaagccg
ttctacgccatcctccaccgcatcgacgtcggcgtcgtcatcgacctcgagcccgcacgc
accgaggaccccgctctctccatcgccggcgcagtccagtcccagaaactcgcggtccgc
gccatctcccgcctccaggcgctacccggcggggacgtcaagctcctatgcgacacagtc
gtggagcatgttcgcgagctcactggttacgaccgtgtcatggtgtacaagttccatgaa
gacgagcacggggaagttgtcgcagagagccggcgcgataaccttgagccttacctcgga
ttgcattatcccgccacagatatcccccaggcgtcgcggttcctgttccagcagaaccgc
gtgcgaatgatcgcagactgccatgccatcccggtgagagtcatacaagatcctgggctg
tcgcagcagctgtgtttggtaggctccacgctacgcgctccgcacgggtgccatgcacag
tacatggcgaacatggggtcaattgcgtcgcttgttatggcagtcatcattagcagtggt
ggtgacgacgagcgaacaggtcggggtgccatctcctcatcaatgaagttgtgggggtta
gtggtgtgccaccatacatcaccacggtgtatcccttttccattgaggtatgcttgcgag
tttctcatgcaggcatttgggctgcagctcaacatggagttgcagcttgcgcaccagctg
tcagagaagcacattttgcgaactcagacgctattgtgtgacatgctactgcgagattca
ccagctggcatcatcacgcagagccccagcgtcatggaccttgtgaagtgcgatggggct
gcactgtattatcgtgggaagtactacccattgggtgtcactcccaccgagtctcagatt
aaggatattatcgagtggttgacggtgtgtcatggggactcaacagggctcagcacagat
agccttgctgatgcaggctaccttggtgctgttgcattaggggatgctgtgtgtggaatg
gcggtggcttatataacaccaagtgattacttgttttggtttaggtcacacacagctaaa
gagatcaaatggggtggcgcaaaacatcaccctgaggataaggatgatggtcagaggatg
cacccacggtcatcattcaaggcatttcttgaagtggttaaaagcagaagcctgtcctgg
gagaatgcagaaatggacgcaatacattccttgcagctcatattgcgtgactccttcaga
gatgctgcagagggcactagcaactcaaaagccattgtcaatggacaacgtcaacttggg
gagctagaattgcgggggataaatgagcttagctctgtagcaagagagatggttcgattg
atagagacagcaacagtacccatatttgcagtagatactgatggatgcataaatgggtgg
aatgcaaagattgccgagttgacaggcctttcagttgaggaggcaatgggcaaatctctg
gtaaatgatcttatcttcaaggaatgtgatgatatagtcgaaaagctactctcgcgagct
ttaagaggtgaggaagacaaaaatgtggagataaagctgaagacatttgggtcagagcaa
tctaagggtgcaatatttgttattgtcaatgcttgttccagcagagattacacacaaaat
attgttggtgtctgttttgttggacaagatgttacaggacaaaaggtggtcatggataaa
tttatcaacatacaaggggactacaaagctattgtacacaatcctaatcctctgctaccc
ccaattttcgcatcagatgagaacacttcttgttcagaatggaacacagccatggaaaaa
cttacaggatggtctagagaggaagttgtcggtaagtttcttattggagaagtgtttgga
aattgttgccgactcaagggcccagatgcattgacaaagttcatggttgtcattcacaat
gctatagaaggacatgattctgagaagttccctttttcatttttcgacaagaatggaaag
tatgtgcaggccttattgacggccaacacaaggagcaaaatggatggtaaatctattgga
gccttttgtttcttgcagattgcaagcgctgaaatacagcaggcatttgagattcagaga
caacaagaaaagaagtgttatgcaaggatgaaagaattggcctatatttgccaggagata
aagaatcctcttagtggcatccggtttaccaactctctattgcagatgactgatttaaat
gatgaccagaggcagttccttgaaactagctctgcttgtgagaaacagatgtccaagatt
gttaaggatgccagtctcaaaagtattgaggatggctctttggtgcttgagaaaagtgag
ttttctcttggagacgttatgaatgctgttgtcagccaaacaatgtcattgttgagggag
agggatttacaacttattcgagatatccctgatgaaatcaaggatgcatcagcatatggt
gatcaatttagaatccaacaagttttggctgacttcttgctaagcatggcacagtctgct
ccatccgagaatggctgggtagaaatacaagtcagaccaaatgtaaaacagaattatgac
ggaacagatacagagcttttcatcttcaggtttgcctgccctggtgagggcctccccgct
gacattgtccaggatatgttcagcaattcccaatggtcaacccaagaaggcgtaggacta
agcacatgcaggaaaatcctcaaattgatgggcggcgaggtccaatacatcagggagtca
gagcggagtttcttcctcatcgtccttgagctgccccaacctcgtctagcagctggtaga
gaaaatcagctgatatgttaa
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