Zea mays (maize): 100381870
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Entry
100381870 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381870
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100381870
09122 Translation
03013 Nucleocytoplasmic transport
100381870
03015 mRNA surveillance pathway
100381870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100381870
03041 Spliceosome [BR:
zma03041
]
100381870
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100381870
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
100381870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
100381870
NCBI-ProteinID:
NP_001168126
UniProt:
K7VKP3
C0P2G1
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All DBs
Position
9:complement(125131364..125136790)
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AA seq
732 aa
AA seq
DB search
MSSYPVLNNRPIDQWRVTDLKDELRKRKLPVKGLKEELVRRLFDSIQSEIEADEADEADE
DVGVNVDDQLPDANASEENTVTVTEVHQETVVHVTQQVEVPTTKAGQESTISPTRRAPSV
DVEEASADEEVPESVAEGNMSFEEVQVHTEITNEPVHEKTTDVDTNDTVVVNDAIDVNSD
LAPAEVKFGATEASKIEEHDFPPAPVDALNSDAAGPMDTDVVTAATSDVGSMDTDVVTRA
PVSDDEEKLELKVDLGNKVSMYDEDNNSSDTMNEDCKPIVSKPNNQVPEVSPDLGSQIKC
ESISTDNLSSNKKNTIKDNLNANNFDLELEVQPKMVQPSSGITSLGGDLQPLDDDKELVK
NQTSLEDIDSTANVDSYKKDSPEGGSPEKLNLDRSSGDESMEEDVVEIKQDEANMKSDDL
GQKNELNSEDVKEVILPDSVVEASKEVTAEEKSAASTEKRKLEDEDIANTEPIKRQRRWT
ADVAKVPERQALSQTGPETPKDIFQPAFKRSFGRSDSTASVDSPKERIVPPAEKPATTSL
RIDRFVRPFTLKAVQELLGKTGSVQDFWMDHIKTHCYVTFSSVDEAMATRDAVYNLQWPP
NNGNKLVAEFVDPQEVKLKVDPPPPPAAPVSPAAITRAPPLQQTQSVPRQAATPKEQLPP
PPPPPLAKPPMADPAAIARERLPPTPKKPEPPVVTLDDLFRKTQSSPRIYYLPLSEEEVA
AKLAAQGKGKKE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttatcctgtgctaaacaaccgaccaattgatcagtggagggttactgatttg
aaggatgagctccgtaaaaggaagcttcctgttaaaggtttgaaggaggaactcgtaagg
cgactctttgactccattcagagtgaaatagaagctgatgaagctgacgaagctgatgag
gatgtgggagtgaatgtggatgatcagttgcctgatgccaatgctagcgaggaaaataca
gttaccgttacggaagttcatcaggaaactgtggttcatgtcactcagcaagttgaagtt
cctaccaccaaagctggtcaggaatccacaatttctcccactagaagggcccccagtgtc
gatgttgaagaggcctcagcagacgaagaagtacccgaatcagttgctgaaggaaatatg
tcatttgaagaagtgcaagtgcatactgaaattactaatgagcctgttcatgagaagacc
acagacgttgacaccaatgatacagttgttgttaatgatgcaatcgatgtgaattcagac
ttggcgcctgctgaagtcaagtttggtgctacggaagcaagcaaaattgaagaacatgat
ttcccccctgcacctgtagatgccttaaattcagatgctgctggtcctatggatactgat
gtcgtcacagctgcaacttcagacgttggttctatggatactgatgttgtcacacgtgca
ccagttagcgatgatgaggagaaactggaactgaaggttgatttgggtaacaaggtgtca
atgtatgatgaagataacaatagttctgataccatgaatgaggactgcaagcccatcgta
tcaaaaccaaacaatcaggtacctgaggttagtccagatttagggtctcaaattaagtgt
gagtcgatttctactgataatctatcatctaacaaaaagaatactataaaagataattta
aatgctaataattttgatttagaattagaggttcagccgaagatggtccaaccatcatcc
ggcattacttcattaggtggagatttgcagccattggatgatgacaaagagctggttaag
aaccagacatctttggaagacatagattccacagctaatgtggactcatacaagaaggat
agtcctgaaggtgggtctccagagaaattaaatctagacaggagttcaggtgatgagtca
atggaggaggatgttgtggaaattaaacaagatgaggccaatatgaaatctgatgatctc
ggacaaaagaatgagcttaactcagaagatgtgaaagaggtgatcctccctgattctgtt
gttgaggcttccaaggaggttacggctgaagaaaagtcagcagcttcaacagaaaagaga
aaacttgaagatgaagatattgcaaacactgaaccaatcaagcgacaacgtcggtggact
gcagacgttgccaaagttccagagagacaagcattgagtcaaactggtcctgaaactcct
aaggatatttttcagcctgctttcaaacgatcttttgggaggtctgattcaacagcaagt
gtagattctcctaaggaacggattgtaccacctgcagagaaacctgccacaacttctttg
agaattgaccgatttgtacgcccatttaccctgaaagctgtgcaggagcttcttggtaaa
actggatctgtacaagacttctggatggaccatatcaagactcattgctatgtgacattt
tcttcggtggatgaagcaatggctactagggatgctgtttacaacctacagtggccccca
aataacggcaataagttggtcgccgaatttgttgatcctcaggaagtgaagctcaaggtt
gacccccctcccccgccagctgctcctgttagcccagctgctatcacaagggcacctcct
cttcaacagactcaaagtgtgccacgccaggctgctacaccaaaagagcaactgccacct
ccaccaccgcctccccttgctaagccacctatggctgacccggcggctatagcgagagag
aggcttccacccactccgaagaagccagagcctcctgttgtgacacttgatgatctcttc
aggaagacacagtcctctccaaggatctactatctgcctttatcagaagaggaggtggca
gccaagctcgccgcacagggcaaaggaaaaaaggagtag
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