Zea mays (maize): 100383056
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Entry
100383056 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383056
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100383056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100383056
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100383056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
100383056
NCBI-ProteinID:
NP_001348870
UniProt:
A0A1D6KUQ4
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Position
1:243941182..243960572
Genome browser
AA seq
901 aa
AA seq
DB search
MEADEASAPPPPPWMQNKSAAAIEASSGPLSAAASRLSARSRALPSSRDFHFYNNFPAFK
SPVGAAAAKADASLGVLGGASILPTRQQPFPVGGDLDDAHDWLVALNDDLLERFGASTDE
FKTLRRKEETSGRRAAPQAGDGFQVVCGKKKKKVGDGGEERVGRVEAFGGFGSVRMVTKD
KAAAPGVKAKVPFHIRTIPRPQDVYCIVVDNSSKPFEHILLDRSEDGTRVVHPLEKLPVE
QIISRNVPDNEPVKPPALDNTPFTFVEDLKTLEVLATKLKDATEFAVDLEHNHYRSFQGL
TCLMQISTRTEDFIVDTLKLRKYLGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVC
NLFDTGQASKVLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYL
LYIYDLMRLRLVNGSSCENDLLLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNA
TQLSVLSSLYRWRDGIARAEDESTGYILPNKTLLEIAKEMPVTSGKLKRMIKSRNSILER
NLNHVINNIRDAIAASGAFESIVEQLKKGKLEELTLADVKNSSEDTEMIPAVDVDNIEDP
SDESAVVPAVITNVGAAPCITSEASLGNMHLEDPVPKTKDSGASSGFTGLTDNKKLSNDQ
QQAAKATVQVSKRPTAFGALFGKAAAGRRPDLFLGFSNVQGKTKVDKITSSVVLPFHHFS
GGAKLSSAALPAKESLHSEPDSIQHSDPACQLEEVIQLDMGTDEQQPPENGNEDDGHCET
EDTEMSKSPSGDPSVTEQRFRSLNEERNVKQNQKTPREFEFSVPVVPFDYAEARKNLVSS
LPKAERRKDDAVARAINTDAGDKQRGSKKPPGGGENEGNFQHPRRRQAFPPSGNRNATYH
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgacgaggcctcggcgccgcctcccccgccgtggatgcagaacaagtcggcc
gcggccatcgaggcctcgtcgggcccgctttccgccgcggcctcccgcctctccgcccgc
tcccgtgcgctcccctcgtcccgcgacttccacttctacaacaacttcccggcattcaaa
tccccagtcggcgctgcggccgcgaaggccgacgcgtccctcggcgtgctcggcggggct
tcgattctcccgacgcggcagcagccgttccccgtgggcggcgacctcgacgacgcgcac
gactggctcgtcgccctcaacgacgacttgctcgagcggttcggcgcctccaccgacgag
ttcaagaccctgcggcggaaggaggagacttccgggcggagggcggcgccgcaggctggg
gacgggttccaagtggtgtgcgggaagaagaaaaagaaggtgggcgatggtggcgaggaa
cgcgtcggcagagttgaggctttcggaggttttggctctgtgaggatggtcaccaaggac
aaggcggccgcgccgggggtgaaggcgaaggtgcccttccacatccgcaccatcccaagg
ccccaggatgtgtattgtattgtggtggacaactccagcaagccgttcgagcatatcttg
cttgatcgcagcgaggatggcactcgggtcgtgcacccattggaaaaactccctgttgaa
caaataatcagcagaaatgttcctgataatgagccagttaagccaccggctttagacaac
actccttttacatttgttgaagacctgaaaaccttggaggtgctagccacaaagctgaag
gatgcaactgagtttgctgtcgatttggaacacaaccattataggtcgtttcagggtttg
acatgcttgatgcagatttcaacaagaacagaggactttattgttgacactcttaagctt
cgtaaatatcttggtgattatctaagagagtttttcagagatccaaccaagaaaaaggta
atgcatggtgcaggtcgtgatataatatggcttcaacgagacttcagcatatatgtgtgc
aacctttttgacacaggccaggcttcaaaggtcttacagatggaccgcaacagcttggaa
catcttttgcaccatttctgtggagtagctgcaaataaagaataccaagctgcagattgg
agattgaggccccttcctgatgaaatgatcaaatatgctagagaggatacacactatctg
ctatatatatatgacctgatgagattgagactagtgaatgggtcatcatgtgaaaatgat
cttcttttagaggtttgcaagcgcagcaacgaaatttgcttgcaactgtatgagaaggag
cagctgactgatacatcatatctacatatacatgggttgaaagaaaacgagctgaatgca
acgcagctgtcagttctttccagtctatatcgatggagagatggcattgcccgtgctgag
gatgagagcactggctatatattacccaataagactctacttgagatagcaaaggagatg
cctgtgacaagtgggaagttgaaaagaatgattaaatcaagaaattcgattttggaacga
aatctcaaccatgttattaacaatataagggatgccatagcagcttctggtgcttttgaa
agtatagtggagcagctgaagaagggaaaactggaagagttaacattggcagatgtgaag
aacagcagtgaggacactgaaatgattcctgctgttgatgttgataacattgaagatccg
agtgatgaatctgctgtagttcctgcagtgattacaaatgtcggtgctgctccctgtatt
acaagcgaagcttccttgggtaatatgcatttagaggaccctgtgcctaaaacaaaggac
tcgggtgcttcatcagggtttactggactgacagacaacaaaaagctgagcaatgaccag
cagcaagcagcaaaggctactgttcaagtatcaaagaggcctacagcttttggagctctg
tttggaaaggcagctgctggaagaaggccagatcttttcctaggattttcaaatgttcag
ggtaagactaaggtggacaagataacgtcttccgtggtacttccttttcatcatttctca
ggtggtgcaaaactttcatcagccgcccttccagcgaaagaatcgttgcattctgaacca
gacagcatccaacacagtgatccagcttgtcagttggaagaagtgatacagttggacatg
ggaacagacgagcaacaaccaccagaaaatggcaacgaggatgatggacactgtgagact
gaagacacggagatgtcaaagtccccttcaggtgacccgtctgttaccgagcaacgattc
cgatcactcaacgaagaaagaaacgttaagcagaaccagaagacacctcgagaattcgaa
tttagtgttccggtggtgccttttgattatgccgaagccagaaagaatctcgtgtctagt
ttgcctaaagctgagaggagaaaggacgatgccgttgccagggctataaatacagacgct
ggagataagcagaggggttcaaaaaagccaccaggtgggggagagaacgagggaaatttc
cagcatccacgaagacggcaggctttcccgccttcaggcaatagaaatgctacgtatcac
cagtag
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