Zea mays (maize): 100383125
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Entry
100383125 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383125
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100383125
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zma01009
]
100383125
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100383125
03036 Chromosome and associated proteins [BR:
zma03036
]
100383125
Protein phosphatases and associated proteins [BR:
zma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100383125
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100383125
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100383125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Me-amine-dh_H
ComGF
Motif
Other DBs
NCBI-GeneID:
100383125
NCBI-ProteinID:
NP_001169262
UniProt:
C0PD86
A0A3L6FD53
LinkDB
All DBs
Position
3:228814126..228822161
Genome browser
AA seq
514 aa
AA seq
DB search
MTMNGAAAPERSPPASPPPLVQAQAPPSPSPTQPLEWRFSQVFGERSAGEEVQDVDIISA
IEFNKSGHHLATGDRGGRVVLFERTDVKDHASRKDAEKADYSISRHPEFRYKTEFQSHEP
EFDYLKSLEIEEKINQIKWCQATNCALFLLSTNDKTIKFWKVQEKKVKKVSEMNLDRSTA
PTNGSPGGTGYLRPSLSNGNVLKPGGLPLLRLPVVTTQETSLAASCRRVYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNTL
AYSSSKGSIRLVDLRQSALCDNHSQIFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILS
RDYMTLKLWDVKMNSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSY
SNIFRVFGCRSGSSEATTLEATRNPTRRQVQTTSRATRSLSTLTRAVRRGGESTGIDANG
NSYDLSTKLLHLAWHPSENLIACAAANSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaacggcgccgctgcaccggagcgctcgcccccagcctcgcccccgcctctg
gtccaggcccaggcgcctccgtcgccatctccgactcagccgctcgagtggaggttctcg
caggtgttcggtgagcgcagcgccggggaggaagtccaggatgttgacatcatctcagca
atagagttcaataaatcgggacatcatcttgccactggagacaggggtggacgagttgtt
ttatttgaaaggactgatgtcaaagatcatgcctctagaaaagatgctgagaaagctgat
tattctatcagcaggcatcctgagtttcgctacaaaactgagtttcaaagccatgagcca
gagtttgattacctcaagagcttggaaattgaagagaagattaaccaaataaagtggtgt
caagcaacaaattgtgcattgtttcttctatccacaaatgacaaaacgataaagttttgg
aaggtccaagaaaagaaagtaaaaaaggtatctgagatgaatttggaccgttcaactgct
cctacaaatggtagtcctggtggtacgggatatctgcgcccatctctctcaaatggcaat
gttctaaaacctggcggacttcctttgctacgccttcctgtggttacaacccaagaaaca
agccttgctgcgagttgccgaagagtatatgctcatgcacatgactatcatataaattca
atatcaaataacagtgatggtgagacatttatatcagctgatgatttgcggataaatctt
tggaatttggaaatcagcaatcaaagtttcaatattattgatgttaagcctacaaacatg
gaagatctcactgaggtgataacatctgctgaattccatcctactcattgcaatacattg
gcgtatagtagctctaagggctccattcgacttgttgatctgcggcaatcagccctttgc
gacaatcattcccaaatctttgagcagcatgaggccccaggttcaagatcatttttcact
gagattatagcttcaatttcggacataaaattttcgaaggatgggaggcatattctcagt
cgtgactacatgactctgaagctttgggatgttaagatgaattctggtcctgttgcaaca
ttccaggttcatgagtatctaaggcctaagttatgtgatttatatgaaaatgactcaatt
ttcgacaaatttgagtgttgtcaaagtggtgatggattaagagtagcaactggttcctac
agcaacatttttcgcgtgtttggttgccgttctggtagcagtgaagcaacaacacttgaa
gcaacccgaaaccctacaaggcggcaggtccagactacctctagagctaccagatcccta
agtactctgacaagggccgttagacgaggtggagagagcactggaatagatgccaatgga
aattcctatgatctgagcacaaagttgctccatttggcctggcacccatctgaaaatcta
attgcttgtgctgcagccaatagcttgtacatgtactacgcataa
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