Zea mays (maize): 100383130
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Entry
100383130 CDS
T01088
Name
(RefSeq) Splicing factor CC1-like
KO
K13091
RNA-binding protein 23/39
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100383130
Spliceosome [BR:
zma03041
]
Common components
Common spliceosomal components
General mRNP proteins
100383130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
100383130
NCBI-ProteinID:
NP_001348876
UniProt:
A0A096R1K6
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Position
5:complement(34097311..34106007)
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AA seq
536 aa
AA seq
DB search
MEFDEYEYLEKAVEPAPPPANGSGSGEKDRGSRRREGDEGRISKRSRSGEDRERGRHRSV
REHRDRDKDDGKEKERSRDSRGKDRDREGREREKERGDRHRPREREVERERRSLSRSERR
RIEEEEMVRELEMERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADE
RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVK
PSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDAM
TGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQASGATTGDLDDDE
GGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLSPTVSAV
GSVPGAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQDECSKFGAVK
HIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYSTKFPNL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgaatacgagtacctggagaaggcggtggagccggctcccccgccggcc
aatggttccggctccggcgagaaggaccgcggctcgcgtcgccgcgagggcgacgagggc
cgcatatcgaagcgctcccgctcgggggaggaccgcgagcggggccggcaccgcagcgtt
cgggaacaccgggatcgggataaggatgacgggaaggagaaggagaggagccgcgatagc
cgcgggaaggacagagacagggaagggagagaacgggagaaggagaggggggacaggcac
cggcccagagagagggaggtggaacgggagcggaggagcctgagccgttcggagcggcgc
cgtatcgaggaagaggagatggtgagggagctggagatggagcgcgagcgcagcgagcga
caccactatcgcgaccgtgacgtcaggcgtaggaaagatgacggggcagagccagaagtt
gatccagaaagggaccagaggactgtatttgctttccagctatctctgaaggcagacgaa
agagatgtttatgagttcttctcaagggctgggaaggttcgtgatgttcgtcttatcatg
gaccgaaactcaagacgttctaaaggagttgggtacattgagttttacgatgttatgtct
gttccaatggcaattgctttgtctggtcaaccgctgcttggacaagcagtgatggttaag
ccatctgaggctgaaaagaacttagttcagtcaaatgcgacatcaggtggtgcggcttca
ggtggagcaagaaagttgtatgttggcaatcttcactcaaatattactgaagaccaatta
agacaggtatttgaaccatttgggcaagtggagcttgtacagcttcctctagatgcaatg
actggactgtgcaaaggttatggctttattcagtttgcccggcttgaagatgcaaaagct
gcacagagtttgaatgggcagcttgatattgccggcagagttattaaggtttcagctgtt
actgatcatgtgggagtgcaagctagtggagctactactggagatctagatgatgatgaa
ggtggaggcttggcgctaaatgcaagctccagagctgctctaatgctcaaattggacagg
agtggtacagcaaccagcttaactggtggtattggtgctgctggagtggctgtaccagct
acttcagttattggggcagcaggagctgcttctcttctgtcaccaacagtttctgctgtt
ggatcagttcctggggcacctgtgcttcctattaccgctcagaatgtgatcatgtccaca
cctacagaattcttgttgcttaaaaacatgtttgacccatcattggagacggatcctgat
tttgacttggatattagagatgatgtccaagatgaatgttccaagtttggtgcagtgaag
catatttttgttgacaaaaatactgcaggcttcgtgtatctgcagttcgatagtgtaact
gcagcagggaaggcccaacaagcacttcatggaagatggttcgccggaaagatgattaca
gcgacatttatgtccgatcaggaatacagtactaagttcccaaacttgtga
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