Zea mays (maize): 100383248
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Entry
100383248 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383248
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100383248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100383248
03009 Ribosome biogenesis [BR:
zma03009
]
100383248
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100383248
Spliceosome [BR:
zma03041
]
Complex A
U1 snRNP components
U1 related factors
100383248
Complex B
100383248
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-60S particles
Helicases
100383248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100383248
NCBI-ProteinID:
NP_001348908
UniProt:
A0A1D6NMP6
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All DBs
Position
3:232253203..232258656
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AA seq
802 aa
AA seq
DB search
MSGGTGSSGRAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQLL
PPPPPLPPPPPRSRDRRDRSRSRSRTPPRRDHRDRDRDRDRRHDEHASSKTASSHHHPAP
VAVADDPSTEAYRRRHEITVTGDNVPTPITSFEAGGFPSEILKEIQRAGFASPTPIQAQS
WPIAMQNQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNSTRNGPTVLVLAPTRELATQILD
EAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRKVSLKQVSYL
VLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMYTATWPKEVRRIADDLLVHPVQVTIGSV
DSLVANSSITQHVEIITPSEKQRRLEQILRSQDSGSKILIFCTTKRMCDQLARTLTRQFG
ASAIHGDKSQSEREKVLNQFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVH
RIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLEDMASRGGGRGRKRNH
WASRPDRGGSRSELDSRYSSRDGLASSGKSESGRGSRGRDDNGSRGRYDPGETDGRSRRS
TRGRSRSRSKSDSRSRSPSPKKSRRHEGRRSRTKSRSRSRSRRNHGASHSKSRSPVASRR
YEKTASGSARPNSGHAEHKSPPRSHSRDDHVNHSDHKDDHKDDHMEDGKMERVDLDRSPS
PHDDKSAPYSPVYNGKASGSMSPNGQPEAGAKFVEPSGKPEPASPVRCSKGRDDDEEGII
DEDGEIGEDDPRANAAVQNGNN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagggactggctcatccgggcgcgcggccccgcggtacgccccggatgacccg
acgctgcccaagccgtggcgcggcctcgtcgacggcaccaccggctacctctactactgg
aacccggagacgaacgtcacgcagtacgagcggcctgtgccccccgagagccagctcctc
ccgcctccgcctccgttgccacccccgcctccacggagccgcgaccgccgcgacaggtcc
agatcccgatcccgcaccccaccccggcgcgaccacagggaccgcgaccgtgaccgtgac
aggcgccacgacgagcacgcgtcctccaagacggcgtcttcccaccaccatccggctccg
gtagccgtcgccgacgatccttccaccgaggcataccgccgccgccatgagatcaccgtc
acgggggataatgtgccgactccaataacttcatttgaggctggtggcttcccgtcagaa
attctgaaggagatacaacgtgctggattcgcaagcccaacacctatccaagcccagtca
tggccaattgctatgcaaaatcaagatgtagtagctattgcaaagactggatcaggcaaa
actcttgggtatctacttcctgggtttatgcatatcaagcgcctgcagaacagcactagg
aatggcccaacagtgctagttttggccccaacaagggaacttgcaacacagattctggat
gaagctgtgaaatttggaagatcttcaagaatttcttgcacgtgcttatatggtggtgct
cctaaaggtcctcagttgagagatttagatagaggggttgatgttgttgttgcaacacct
ggaaggttaaatgacatcttggagatgcgaaaggtaagtcttaagcaagtgtcatatctt
gttctggatgaggctgatcgcatgctggacatgggctttgagccacaaatacggaagata
gtgaaagagatacctcaccgtcggcaaacccttatgtacaccgctacatggcccaaggaa
gtccgaaggattgcagatgatcttcttgttcatcctgtacaggtgacaattggaagtgtt
gattcacttgttgctaatagttctattactcagcatgtagagatcataacaccctcagaa
aaacaacggcgcctggagcagatattacgatcccaggattcaggttcaaagatattaata
ttttgtaccaccaagaggatgtgtgaccaacttgcaaggacactcaccaggcagtttgga
gcttcggccattcatggtgacaagtcccaaagtgaaagggagaaggttctgaatcagttt
cgatctgggcggtctcccattttagtggcaactgatgttgctgcgcgaggtttggacatc
aaagatatcagggtagtgatcaactatgacttccccactggtgttgaagactacgttcac
aggattggcaggacaggaagggctggtgccactggtgttgcatatacatttttttgtgat
caggattcaaaatatgctgctgacctaatcaaaattctggaaggggcaaaccaacgagtg
ccccgtgatttagaggatatggcttctcgtggcggtggacgaggtaggaagaggaaccat
tgggcatcccgccctgacaggggtggttcacgttctgaactggattcaaggtacagcagc
agagatggactagcatcttctgggaaatcagagagtggtcgcggcagtcgtggaagggat
gataatggtagccgtggcaggtacgaccctggtgaaaccgatgggcgatctcgtaggtct
actagaggccgcagtagaagccgtagcaaaagtgacagtagaagccgtagcccaagtccc
aagaagtcacgtcgtcatgaaggtagacgtagcaggactaagagcaggagcaggagcagg
agccgtagaaatcatggcgctagccacagcaagagtcgcagccctgtcgctagccgtagg
tatgaaaagactgcttcaggatctgctcggcctaactcggggcatgcagagcacaaaagc
cctccaagatctcactctagggatgaccatgtgaaccactctgaccacaaggatgaccac
aaggatgaccacatggaagatgggaagatggaaagggttgatcttgatcgctcgcccagc
ccacacgatgacaagtctgctccatatagtcctgtgtacaatggcaaagccagtggctca
atgagccccaacggtcagccagaggcaggtgccaaatttgttgaaccttctgggaaacct
gagcctgcatctccagtgcgctgcagcaaaggcagagatgatgatgaggaaggtatcata
gacgaggatggagagattggtgaggatgatccgcgtgcaaatgcagctgtgcagaatggt
aataactga
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