Zea mays (maize): 100383283
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Entry
100383283 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383283
KO
K13095
splicing factor 1
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100383283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100383283
Spliceosome [BR:
zma03041
]
Complex A
Other components
Complex A specific factors
100383283
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
Motif
Other DBs
NCBI-GeneID:
100383283
NCBI-ProteinID:
NP_001169414
UniProt:
C0PER5
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Position
6:complement(8314731..8325961)
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AA seq
771 aa
AA seq
DB search
MTTKLEQSSAEHRPAKFAAPSSLTPKISMFGAKAGFIIPKNKLAGSLVIRSTSDKNETPT
ASNEDSSRHVHRKTKWGPDLALDPVVCKGRALAYQTRVEQISKQLKSGALDTSEIDGSVS
AGNELNSIGPDILKENELGNVELLELERRELIGEILRLNPGYKTPENYKPVLRETKIPVP
AEAHPGNNIIGVLLGSESNTQKRLHEETGAVIRVYGTKKINGEKSEIRHQDINETQDAYE
DLYINVSADSYDKVDAAVVLIELLLAPVSVKSTATSTAATVSSADTSKDAVSANVQLEQN
TTSQPDLLHYQSHNAPWLPTPQTNAPSIPSTGPVLSTLPNNPSQPQPPAGSFSMPPYTGQ
PPHMNSMPANPFPVPGPQQPVPSNQQHPPQFRANSSIGPFFGQPPGIVSQQMPPSSSMPP
PVRPLQIPHASGGWPPFSPVTSQSHRPLQAPPTFMAVRPPISVSPLGATPPQGPIALTPP
NMPTMYRGQHPPVPNFTGSAPLVSRPPGGGAQSFPTAAPQGPSSVAFPGGPSLRPPYPPA
PDQARGPPPAFSPVGSTPGMVPPPIASSGLPAPRPANTSCIQTQVVAPLRPPLPAAGDFT
FRPAIPPAHAPEFAAPGSQMGAIHGRTHHPGPFSSHPGDQKNPSQGFQGPFDGSRPMYTT
NQARMHAPPPPHFHGAFPRNASPLEFPAGFRGAWPSVQAPPMPAPSHPSSFPPFQLRPPP
PPQQDMSGAGGTRWPGGNQIYNPFAPTAAAAAQRAEADPEYEDLMASVGMK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaacttgagcaatcttctgcggagcatcgcccagcaaaattcgcagcacca
tcgtctttgacccccaagatctcaatgtttggggcaaaagctggattcatcatacctaag
aacaagctggccggctcactcgtaatccggagcaccagtgacaagaatgaaacaccaact
gcatccaacgaagatagcagcaggcatgttcacagaaagacaaagtgggggcctgacctt
gctttggaccctgtcgtgtgcaaaggaagggctttggcctaccagactcgagtggagcaa
atttccaagcagctgaagtctggagctttggacacgtccgaaattgatggttcagtgtct
gctggaaatgaattgaattctattggtcctgacatcttgaaagagaacgagctgggaaat
gttgaactattggaacttgaaagacgagagcttatcggtgaaatactccgtttgaatccg
ggatataagacacctgagaactacaaaccagtacttagggagacaaaaatccctgttccg
gcagaagcacacccaggaaataatattattggagttcttctaggatctgagagcaatacc
cagaagagactacatgaagaaactggtgctgtcattcgagtgtatgggactaagaaaatc
aatggagagaagagtgagattcgtcatcaagacataaatgaaacacaagatgcttatgaa
gacctatacatcaatgtatcggctgactcttatgataaagtagatgctgcagttgtgttg
attgagctgcttcttgctcctgtttccgtaaagtcgacagctacttcaacagctgctact
gtttcttcagcagatacatccaaggatgcagtttcagctaatgtgcaactggagcagaat
accacgtcacagccagatctacttcattaccaatcacacaacgcaccttggctgcccaca
ccccagaccaatgctccatcaattccttccacggggcctgttttgagtacattacctaac
aatccatcgcagccacaaccgcctgctggttctttcagtatgcctccatatactggtcaa
cctcctcacatgaatagcatgccagcaaatccatttcctgttcctgggcctcagcaacca
gtaccaagcaatcaacaacatccacctcaatttcgagctaactcctcgattgggcctttt
ttcggtcaaccacctggtattgtaagccaacaaatgccaccatcttcctcaatgccaccg
ccagttagaccccttcaaataccccatgcctctggtggctggccccctttctctcctgtt
acatcacaatctcataggcctctgcaagctccaccgacttttatggcagtgagacctcct
atttccgtctctcctcttggtgcaactccaccgcaaggtcccattgcattgacaccacca
aatatgcccaccatgtaccgcggccagcatccaccagtaccaaatttcactggttcagcg
ccattggtttccaggcctcctggtggtggggctcagtcttttcctacagctgcgcctcaa
ggcccttcctcagtagcatttcccggtggaccatcgctgcggccaccttaccctccggcg
cctgatcaagcgagggggccacctccagctttctctccagttggatcaactcctggcatg
gtgcctccacctattgcatcttccggcctgcctgccccgcgtcctgcgaacacgagctgc
atccagacacaagtagtagcccctttgagacctccgctcccagccgcgggcgattttact
ttccggcctgccataccaccggcgcatgctccagagttcgcagcaccaggcagtcaaatg
ggagcaatacatggcagaactcaccaccctggaccattctcctcccatcctggtgaccag
aagaaccccagccaaggtttccaagggccgtttgatggcagcaggcccatgtacacgacg
aatcaggctcggatgcacgctccacctcctccacacttccacggagccttccccaggaac
gcatctcctcttgagttcccagcggggttccggggagcctggccgtccgtgcaggcacct
ccgatgccggcaccgtcacatccatcgtctttcccgccgtttcagttgaggccaccgcca
ccgccgcagcaggatatgtctggcgcaggcggcaccaggtggcccggtggcaatcaaatc
tacaacccttttgcaccaacggctgcggcggcggctcagagagcggaggctgaccctgag
tacgaggatctcatggcatcagttggcatgaagtag
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