Zea mays (maize): 100383441
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Entry
100383441 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100383441
KO
K22804
structural maintenance of chromosomes protein 6
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
100383441
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100383441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
SbcC_Walker_B
KxDL
SMC_hinge
RsgA_GTPase
Baculo_PEP_C
Bacillus_HBL
ABC_tran
MukB
Motif
Other DBs
NCBI-GeneID:
100383441
NCBI-ProteinID:
NP_001169562
UniProt:
C0PG09
LinkDB
All DBs
Position
7:85591993..85635360
Genome browser
AA seq
1040 aa
AA seq
DB search
MAAGTISRIRLENFMCHSSLHIELDKHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRA
ASLKDFIKTGCSYAAITVDINNHGEDAFKPEVYGDTIILERRITESASSTVLKDQHGRKV
AHRKDDLNEIIEHFNIEVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLA
TIRDNLNIAASIVEELEASIRPALRELDEIQEKIKNMEHIEEIAHEIENLNKKLAWVWVY
DVDKKIGGQQEYLEKLKERIPACQERIDRNIAIIEELRKEFIVKKENFKSFLEKTQEARR
MKEKMDHDIREAVKLKMDLEKEHARGRQTLNKMNARVVQLEEQVHEFELQHMQQTQAEVS
QVEDSIRELQQEINSAHLNATRLSEKEKKSSEELRAIIKNIGDIGKEIEEDGRRINQLRS
QIDDIRRRQQNKLTAFGGDRVPSLYKSVERHMSKFKCPPIGPIGYHLQLASDSWSVAIEY
ALGRLLDAFIVSCHKDSLVLRECAKEVNYRNLQIIIYDFTKPRVDIPDHLLPSTPHPTVL
SVIHSEIPTILNVLVDQGHAERQVLVRDDETGKSVAFDQRIRNLKEVYTSDGCKMFCRGS
VQTILPANRNWRAGRLCTSLEEKITEMEQEATEIKQINSERLDRKRKLFADRDSIDLELR
QLKRKREDEELHVERKKAQLVDTKKISIDNSHAAAVDTSELVVEMMQVKEDIENQELVVQ
KINLKLTDALQEENNRRASYKDFIESVHAEMGSISDAERELQLVEEKIHDAEQEKAHYER
VMETKVLGPITATESELTRLQQLHQEYFEKASTICAESEVEALGGVEGSTLEQLSARIKK
LKQKFQQESRRYTETIDDLRALHDKKGQKILRKQQMYSGFRDKLNACQKALDLRWKKFQR
NAGLLKRQLTWLFNEHLGKKGISGHINVDYKNEVLSVELTMPQDASRDTIRDTRGLSGGE
RSFSTLCFTLSLHGMAEAPFRAMDEFDVFMDAVSRKISLDTLVDFAVAQGSQWIFITPHD
ISMVKAGDRIKKQQMAAPRG
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggactatctcccgcatccggctagagaacttcatgtgccactccagtctc
cacatcgagctcgacaagcacgtgaatttcatcaccggccagaacggaagcgggaagagc
gccatccttacggctctctgcgtcgcctttggctgccgtgctaagaacacccagcgcgcc
gcctccctcaaggatttcatcaagaccggctgcagctatgcagcaattactgtggatatt
aataaccatggggaagatgcgtttaagcctgaagtatacggggacactattatattggaa
cgcaggattactgaatcagctagttctacagttttgaaggatcaacatgggaggaaggtg
gcacatcgcaaggatgacctaaatgaaataattgaacattttaacattgaagttgaaaac
ccttgtgtaattatgagtcaagacaaaagcagagagtttttacattcaggaaatgacaag
gataagttcaagttcttttttaaggctactcttcttcagcaagtgaatgacttgcttgct
acaataagagacaacctgaacattgcggcctctatagttgaagaactggaagcgtcaatt
aggccagcgcttagagaacttgatgagatccaggagaagataaagaatatggaacacatt
gaagaaatagcacatgagatcgaaaatctgaataaaaagttggcttgggtatgggtttat
gatgttgacaagaagattgggggacaacaagagtatcttgagaaactcaaagagcgtatc
cctgcgtgccaagaacgaattgatcgaaatatagccattatagaggaactgaggaaagaa
tttattgtgaagaaagaaaattttaaatcctttttggagaagacacaagaagcaaggagg
atgaaggaaaaaatggatcatgacattcgtgaggctgtgaaactgaagatggatctagag
aaagagcatgctcgtggaaggcaaacattgaataaaatgaatgcccgtgtggtacaacta
gaggagcaagttcatgaatttgagctgcagcatatgcaacaaactcaggctgaagtatct
caagttgaggatagcatacgggaattacagcaggagataaactctgcccatttaaatgct
acaaggttaagtgagaaagaaaaaaaatcatctgaagaactacgggccattattaaaaat
atcggtgacattggaaaagagatagaagaagatggacgtaggatcaatcaactgagaagt
caaattgatgatatacgacggcgccaacaaaacaaactaacggccttcggaggagataga
gttccgagcctctataaatcagtagagagacacatgagtaaattcaaatgccctcctatt
ggtccaataggatatcatctgcaactggcaagcgattcctggtctgttgcaattgaatat
gcattagggaggttattagatgctttcattgtctcatgtcataaggattcactcgtttta
cgagaatgtgcaaaagaagtgaactaccgcaaccttcaaattattatatatgacttcact
aaaccacgggttgacattccagatcatttgcttccgtcaacgccacacccaacagtactt
tcagttattcattcggaaattcctactatattaaatgtgttagtggatcagggccatgca
gagagacaggtcctagttcgggatgatgaaacgggaaagtctgttgcatttgatcagagg
atacggaatctgaaggaagtatatacttctgatggttgcaaaatgttttgtagaggttct
gttcagaccattcttcctgcaaataggaactggagagctggtcgtttgtgcacttctcta
gaagaaaaaataactgaaatggagcaggaagctactgaaattaagcaaataaactcagag
aggttggatcgcaaaaggaaattatttgctgatcgagacagcatcgatttagaattgaga
cagttaaagagaaaaagagaagatgaggagttgcatgtggagcgtaaaaaggcacagttg
gttgataccaagaaaatttctattgacaatagtcatgcagctgctgtggatacctctgag
ctagtagttgaaatgatgcaagtgaaggaagacattgagaaccaagaattagttgtgcag
aaaattaatttgaaacttacagatgctttgcaagaagagaataatagaagagcgtcttac
aaggacttcattgagtctgtacatgctgaaatggggtctattagcgatgctgagcgtgaa
ttgcagcttgttgaagaaaaaatacatgatgctgagcaggagaaggctcactatgaacgt
gttatggaaacaaaggttttaggtcctattacagcgactgaatcagagttgacacgtctt
caacaacttcatcaggagtattttgaaaaggcttcaacaatttgtgccgagagtgaagtg
gaagctcttgggggtgttgaaggatcaaccctagaacaattaagtgctcgtattaagaaa
ttaaaacagaaatttcagcaagaaagcagaagatatactgaaaccattgatgatctgaga
gcactgcatgacaagaagggacagaagatcctgagaaaacaacaaatgtattcaggtttt
agggacaaattaaatgcatgtcaaaaggcactggacttgagatggaagaagtttcagaga
aatgcgggtcttttgaagcgtcagcttacgtggctgttcaacgagcacctgggaaagaaa
ggtatcagtgggcacatcaatgtagattataagaatgaagttctgtctgttgagctgaca
atgcctcaagatgcgtctcgtgataccattagagacactagaggactttcaggtggagaa
cgatctttctcaaccctttgcttcaccttgtctcttcatggaatggccgaagcaccattt
agggccatggatgagtttgatgtattcatggatgcggtgagccgcaaaataagcttagac
accctagtagattttgctgtcgcacaagggtctcaatggatatttataacccctcatgat
atcagcatggtgaaggctggggataggatcaagaagcagcaaatggctgctcctcgcggt
tga
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