Zea mays (maize): 100384304
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Entry
100384304 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100384304
KO
K03678
exosome complex component RRP45
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100384304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100384304
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100384304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100384304
NCBI-ProteinID:
NP_001170333
UniProt:
C0PH87
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Position
5:complement(174743611..174750036)
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AA seq
393 aa
AA seq
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MEHLRWRPTVNERDFIECALQSDLRVDGRHSFDFRKLKITFGREDGSSEVQLGETHVMGY
VTVQLVQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRESRAVDM
ESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDGQQVTVH
DPEVRDPLPLTIHHMPIAVTFAYFGEGNIVVLDPTYKEEAVMGGRMTAIVNSNGDVCAIQ
KAGGEGVMSSVIMQCLRIASVKAADITSKIKKAVDSYTTEKALKKVKRLPTSVPQKINVT
NVTMDGKGDGELEKQSVQMHSDVQQISKDPPTMVKASSREDAQPMTESSNAEVNTSSAVA
AGESESHEIGSPKSLKDAIKPKHKRKKKKSDRS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctccggtggcgccccacagtgaacgagcgcgacttcattgagtgtgcgctc
cagtctgacctccgtgttgacggccgccactcctttgacttccgcaagctcaagatcacc
ttcggcagggaggatggctcgtcagaggtgcagctcggggagacacacgtgatgggctac
gtgaccgtgcagctggtgcagccataccgtgacaggccgaatgaggggacgctggccata
ttcaccgagttctcacccatggccgacccctcctttgagcctgggcgtcctggggaatta
gcaattgagcttggccgagttattgaccgtggcctcagggagagtcgagctgttgacatg
gagtccttgtgtgttgttgctgggaagcatgtctggtctgtgcgtgtggaccttcacatc
ttggataacggagggaatctcattgatgcagctaatatcgctgcattggcagctttatct
actttccggaggcctgaatgcacggttggtggggacgatggtcagcaagttacagtgcat
gatcctgaggttagggatccacttcctcttacgatacaccatatgcccatagctgtaaca
tttgcatattttggtgaaggtaacatcgtggttcttgatcccacatacaaggaagaagca
gtaatgggagggaggatgactgctatagttaactcaaatggggatgtttgtgccattcag
aaagctggtggagagggtgtcatgtcaagtgttatcatgcagtgtttaagaattgcttcg
gtaaaggctgctgatataacaagcaaaataaagaaagcagtagactcatacaccaccgag
aaagccctaaagaaagtaaaacgtttgccaacctcggttcctcagaaaattaatgtcact
aatgtaactatggacggcaaaggtgatggtgaattggaaaagcaatctgtgcagatgcat
agtgatgttcagcagataagcaaagatccaccaactatggtcaaggccagcagccgtgag
gatgcccaaccaatgactgaatcatctaatgctgaggtgaacacatcaagtgctgtggct
gctggagagtctgagtcccatgaaattggatcgccgaagagtctaaaagatgctatcaaa
ccaaaacataaaagaaagaagaagaaaagtgacaggagttag
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