Zea mays (maize): 100384475
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Entry
100384475 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100384475
KO
K12118
cryptochrome 1
Organism
zma
Zea mays (maize)
Pathway
zma04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100384475
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
100384475
NCBI-ProteinID:
NP_001170477
UniProt:
C1KGA5
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Position
5:179032822..179036758
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AA seq
699 aa
AA seq
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MSASQSSMSGAGEPGARAVVWFRRDLRVEDNPALAAAPRAAGEVVPAYVWAPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGACRLVTRRSSDAVVALIDLVRSTGATHLFFNHLYDPL
SLVRDHRVKEQLAAEGIDVQSFNADLLYEPWEVLDEDRRPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLSRCPWDELVFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLMDY
SVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNDGNHAGEESCTLFLRSIG
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WVHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIV
ELDAAKGRLQAALSEMWQLEAASRATMNNGTEEGLGDSSDEPPIDFPQELRMEVDRQPVQ
PAIHAPGVTGRRREDQMVPSMTSSFIRAETELTADFGHTSEDSRPEVPSNIHHLQARPER
EETVDGGTGNAVRVHGNHHQQNLQNNMHRVLGIAPSISEASSSWTGRDGGVVPVWSPPAA
SGHSDSYAADEADISSRGYLDRHPQSHTMMNWSQLSQSL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtcacagtcctcgatgagcggcgccggggagccgggggcgcgggcggtggtc
tggttcaggcgggacctgcgcgtggaggacaacccggcgctggcggcggcccctcgggcg
gccggggaggtcgtgccggcgtacgtgtgggcgccagaggaggacgggccctactacccc
ggcagggtgtcccggtggtggctcagccaaagcctcaagcacctcgacgcctcgctccgc
cggctcggcgcctgccgcctcgtcacccgccgctccagcgacgctgtcgtcgcgctgatc
gacctagtccgcagcaccggcgccacccacctcttcttcaaccacctctacgacccgctg
tcgctggtccgggaccaccgcgtcaaggagcagctggcggccgagggcatcgacgtgcag
tccttcaatgccgatctgctgtacgagccgtgggaggtcctcgacgaagaccgccgcccc
ttcaccatgttcgcgccattctggaacaggtgcctgtgcatgccggaccccgccgcaccg
ctgctgccgcccaagaggatcaattcaggtgacctgtccaggtgcccgtgggacgagctg
gtctttgaggacgagtccgagaggggcagcaacgcgctgctcgcgcgggcgtggtcacca
gggtggcagaatgctgacaaggcgctgacggccttcctcaacggcccgctgatggactac
tccgtgaaccgcaagaaggccgacagcgccagcacgtcgctgctgtccccgtacctgcac
ttcggcgagctcagcgtccggaaggtcttccaccaggtccggatgaagcagctcatgtgg
agcaatgacggcaaccacgccggcgaggagagctgcaccctgttcctccgctccatcggc
ctgcgggagtactcgaggtacctcaccttcaaccacccctgcagccacgagaagcccctc
ctgtcgcacctcaggttcttcccctgggtcgtcaatgaggtgtacttcaaggtctggagg
caagggaggaccggctaccctctcgtcgacgccggcatgagggagctctgggccaccggc
tgggtccatgaccgcatacgcgtcgttgtctcgagcttcttcgtcaaggtgctccagctg
ccatggcgctgggggatgaagtacttctgggacaccttgctggatgctgaccttgagagc
gacgcgctaggctggcagtacatttctgggtctctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtttgaagggtacaagtttgatccgcacggggagtacgtccggcga
tggctaccggagctggcaaggctgccaacggaatggatacaccatccatgggacgcacct
gagtctgtgctgcaagctgcaggaatcgagctaggatctaactaccctctccccatagtg
gagctggacgcggccaagggcaggctgcaagcggccctgtcagagatgtggcagctggag
gcggcgtcgagggccaccatgaacaacgggacggaggaaggcctcggcgactcctcggat
gagccgccgatcgacttccctcaagaactacggatggaagtggaccgacagccggttcaa
cctgctatccacgcaccgggagtgactggtcggagacgagaggatcagatggtgcccagc
atgacttcctcgttcattagagctgagaccgaactcactgcagattttggccacaccagt
gaggacagtaggccagaagtgccatcaaacatccaccatttgcaggctcgcccggagagg
gaagagacagttgacggtggcactggcaatgctgtcagggtgcatggcaaccatcaccag
cagaaccttcagaacaacatgcaccgcgtgctaggtatcgctccatcgatttcagaggca
tcaagcagttggacgggcagggatggtggagtggtaccagtctggtcgcctccggcagct
tcgggacactctgattcttatgctgccgatgaggctgacatttccagtaggggttatctg
gacaggcatccacagtcacatacgatgatgaactggagccagctctctcagtcattgtga
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