Zea mays (maize): 100384700
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Entry
100384700 CDS
T01088
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100384700
09122 Translation
03013 Nucleocytoplasmic transport
100384700
03015 mRNA surveillance pathway
100384700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100384700
03041 Spliceosome [BR:
zma03041
]
100384700
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100384700
Spliceosome [BR:
zma03041
]
Common components
Common spliceosomal components
Cap binding complex
100384700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
CCDC39
ATG14
DUF7935
DUF6144
CCDC93_CC
TPR_MLP1_2
DUF5798
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
100384700
NCBI-ProteinID:
XP_008655594
UniProt:
A0A1D6K2W2
LinkDB
All DBs
Position
1:59143896..59169942
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AA seq
866 aa
AA seq
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MSAGWRTLLLRIGDRCAEYGGSADHKEHIETCYGVLSREYEHSRDAIFEFLLQCTEQLPH
KIPFFGVLIGLINLENEDFSKAIVDTTQANLEDALHNENRDRIRILLRFLSGLMCSKVVV
PSSIIETFETLLSSAVTILDDETGNPSWQPRADFYVYCILASLPWAGPELFEQVPDEFER
VLFGIQSYISIRRHFDDIAFSVFETDEGHSPNKKDFMEDLWERIQALSRNGWKVKSVPKP
HLPFEAQLVAGKSHRLSPISCPPPTPSQSSSEMLKGQEKHEADMKYPQRLRRLHIFPMNK
AENMQPVDRFVVEECILDVLLFFNGCRKECAFYLVSLPVSYRYEYLMAETIFSQLLLLPN
PPFKPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLSNF
QFIWPWQEWSYVKDLPKWAPQRVFVQEVLEREVRLSYFEKIKQSIEDAAELEELLPPKAG
PNFKFHSDESNESTDGLKLSKELIGLIRGKKSTYDIILWVEEQIIPKNGTEFALDVVSQT
LLDMGSKSFTHLVTILERYNKIISKLCPNEEMQLLLMNGVSAYWKNSTQMTAIAIDRMMG
YRLISNLAIVKWVFSPANVEQFHVSDRPWEILRNAVSKTYNRISDLRKEIQSLKKGLQVA
KEASAKNRKELEEAKSVLEIVEGQPAPAERPGRIRRLESHVKNAEDEERTLEESLEAKGV
LLARAHEESKDLLKLLFKSFVDVLTERLPPVSVDGEIPNLRSGDQNVNFAAQNSEAATME
IDNENGADNNSEPNERNTKNAYNVGELEQWCLCTLGYLKSFSRQYASEIWSNIAMLDEVF
VGDVHPLIRKAAFSGLRRFTNEGSHP
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggctggaggacgctgttgctgcgcatcggcgatagatgcgccgagtatggg
ggctccgccgaccacaaggaacacatcgaaacttgttatggtgtactatcccgagaatat
gaacactccagagatgcaatatttgagtttctccttcaatgcacagaacaattgcctcac
aagattcctttctttggagttttgattggtttgataaacttagaaaatgaagacttcagt
aaggctattgtagataccacacaggctaacctagaggatgccttgcacaatgaaaatcgt
gataggattaggatattgctgcgatttctcagtggtctgatgtgcagcaaagttgtagtt
ccaagttcaatcatcgagacatttgagactctattatcatctgctgtaacaatattagat
gatgagactggcaatccttcgtggcaacctcgtgcggacttctatgtttattgtattttg
gcttcacttccatgggctggtccagaattgtttgagcaagttccagatgagttcgagaga
gttttatttggtatacagtcttacataagtatcaggaggcattttgatgatattgctttc
tctgtctttgagacagatgaaggccactctcctaacaaaaaggattttatggaagatctg
tgggagcgcattcaagctctttcccgtaatggatggaaagttaaaagcgttccaaaaccc
cacttgccatttgaagctcagctggtggccgggaaatcacatcgcctttcccctataagt
tgccctccacccactccctcgcagtcatcttctgaaatgttaaaaggtcaggagaaacat
gaagccgatatgaagtatcctcagagacttcgtagactacatatcttcccaatgaataaa
gctgagaacatgcagcctgtagatcgttttgttgtggaagaatgcattttggatgtgcta
cttttcttcaatggatgtcggaaagaatgtgcattttatctggtcagcttgcctgtgtct
tatcgctatgaatacctgatggcggaaaccatattttcacagctactattgttgccgaat
ccaccattcaagccaatttactatacactggttatcattgatctttgcaaggcattacca
ggtgcattcccttcagttgtggtaggagcagtgcatgctctttttgacagaattagtaac
atggatatggagtgccgcaccagacttatactatggttttcacaccacttgtcaaacttt
caattcatttggccttggcaggagtggtcttatgtcaaggacctcccaaaatgggctcca
caacgggtttttgtccaggaagtactggaaagggaagttcgcttgtcgtactttgaaaaa
atcaagcagagtatcgaggatgctgctgagttagaagaactgctacccccaaaagctggg
cctaatttcaaattccatagcgatgaaagcaacgaaagcactgatggcctgaagttatcc
aaggaacttattggcttgattagaggaaagaagtctacatatgatattattttatgggtt
gaggaacaaataattccaaaaaatggtactgaatttgcacttgatgttgttagccagacg
cttcttgacatgggttcaaaaagtttcacccatcttgtcactattttggagagatataat
aagataatctctaagctatgtccaaatgaggaaatgcagctactgttaatgaatggagtc
agtgcttattggaagaacagtacccagatgactgctatagctattgacagaatgatgggt
tatcgcctgatatccaatttggctatagtcaaatgggttttttctcctgccaatgttgag
caatttcatgtttctgatcgaccatgggagattcttagaaatgctgttagtaaaacatac
aatcggatcagtgacctccgcaaagaaattcaatcactcaagaagggtcttcaagttgct
aaagaggctagtgcaaaaaacagaaaggagctggaggaggccaaatcagtgcttgagatt
gtagaggggcaacctgcaccagctgaaagaccaggtaggataaggcgactagaatcacat
gtcaaaaatgcagaggatgaggaaagaactcttgaagaatctttagaagcgaagggagtt
ctccttgctcgggctcatgaggaaagcaaggacttgcttaagctactctttaagagcttt
gttgacgtgctcactgaacgtttgccgcctgtctctgttgatggggaaattcctaatctg
cgcagtggagatcaaaatgtaaattttgcagctcaaaattctgaagcagcaacaatggag
attgacaatgaaaatggagcagataataatagtgaaccgaatgagcgaaacacaaaaaat
gcatataatgttggagagcttgagcagtggtgtctctgtacactgggttatctcaagtca
ttttcccgccaatatgcaagtgagatttggtcaaacatagcaatgttggatgaggtcttc
gttggggatgttcacccacttatccgaaaagctgctttctctggtttgcgcagatttacc
aatgaagggtctcatccttga
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