Zea mays (maize): 100501287
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Entry
100501287 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100501287
KO
K14303
nuclear pore complex protein Nup160
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100501287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100501287
03036 Chromosome and associated proteins [BR:
zma03036
]
100501287
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100501287
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100501287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Beta-prop_WDR35_2nd
Death_2
Motif
Other DBs
NCBI-GeneID:
100501287
NCBI-ProteinID:
NP_001349391
UniProt:
A0A1D6H0K1
LinkDB
All DBs
Position
5:80845642..80866994
Genome browser
AA seq
1500 aa
AA seq
DB search
MAAPAARRIVGAEVPIPGSDKLRWIDLTIPSSSAAAPASPSDPFVCVPPRAASGCHIIPS
GDSQYYLSWRIHEEHPNVLEVIELSPSKEFPSFGLRLAFQEALSPFAFLCEREGRRQGEL
VYMLYVLTVSGVALLCHLRSPFSYVSGSVLHQDDIAEFNLQTQAQSAKVTAVTAKPGCIV
IGRQDGSICSYSLGKLAPNSPGFSNELRDDAGIGRLWTLMSRTKTVGPVQDIVATVVNER
DLLFVLHLDGHLRIWDNHMKLLNYNVHSNDIEGHPSRLWVGKADDDQELISLAILHQNTV
VQGCDYVAVYGFGFSAAERFMFSSEPSISTIPLLEGKLADLKIATYKLWILKEFGSMLYE
ILQYDIDTETAKCCSEKVCCYVLQEDAISEQLFQSSDNALDDLVWTADSMFSSLKEQAFT
LISSMFLRRLLQPGVNHCSALRETLLEHKRFLSDSEFQSLTANGLRKEILSIIEQEGSSQ
TASATAYHWKQFSARYLHNWCWHNKPYGLFLDTTNEVFGLVRKGSFSLFRCLEGLEMLIY
GYDHGVNLLDDVSDFELLNEVLRCMGNIHHLLGRSSTAAYYESLISSIISSDEIVSHIVK
ILETGFSHQSSSSLSTLLGMDTYVERRQAAHKSQRKFSVEMLRSFHTLQSRSASWSAVFD
VIEKFMKCLNTNMNVQSYGSKRVCNVNSVLLVQATSQVARTMFECAFDLFLFLSYLVGVG
GQVSLLQNDVARIKLKLFPMIQDILGQWIVLHFVGTSPTSPPTIDDFSYQLSSLQLGKSD
ELSLHRKLGCSDFTLASLLDFPKSPEGDVMSPCFLGPAEIINLVRRFSSLIMHGGNFECV
HTFLGCTINLSAVLIRHSQYEAAQNLLGILETYLNNGKVSHTGQDADTACSAYLHLNGFC
LLMIAHDEANIILRESKVHDAIRCFFRAASGYEAPKALENFSLETGFQVSGESRSISLWR
LNYYEWAMQIFEQHSMSEGAYQFALAALELVDIVDGIDNGIEAEGLPETAAMIKGRLWAN
VFKYSLDLKHFHDAYCAIVSNPDDDSKYICLRRFIIVLCDLGETKVLCDGEIPFTGLVEK
VEQELFWKAERSDLSSRPNLYKVLYSFEAHRNKWRKAAAYMYRYFVRLNREGNAGGSHQL
PHVLQERLHALSAAINALQLVDPSFAWLDSICEADDKISPSKRPRNLLMENSAFGTNSEL
SRLQFCVDIEILEKEYILTEAQYMLSTLKSSFDFSESQSIESLMDILINEKLYDIAFTIV
LKFWKESEIKKQLDRVFSVIAQQCCSNRSDNKSSKQVPLLPSSENDAWEINNRSIAVTQQ
LQGSNHWETLELYLDKYKDLHPRLPVIVAETLLYTDPEIELPLWLVQMFKANKAGNKISW
GMSGKEADPAALFRLYINYGRHAEATNLLVEYLESFASSRPVDVLHRKKMSAVWFPYTAV
ERLWCQLGEMQRAGHSVDQCDRLKKLLHGALMSHLQQVVVDSDDVLSSVGDGQGMEDQSS
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccgccgcccggagaatagttggcgctgaggttcccatacccggctcggac
aagctgcggtggatcgacctcaccatcccctcgtcctccgccgctgcgccggcgagcccc
tccgatcccttcgtctgcgtgcccccgcgtgctgcctcggggtgccacatcatcccttcg
ggcgattctcagtattacctctcgtggaggattcacgaggaacacccaaatgtgctggag
gtcattgaacttagtccctccaaggagttccctagctttggactgcgtcttgccttccag
gaggcgctatctccattcgcctttctatgtgaacgagagggtcgcaggcaaggggagctt
gtatatatgctatatgtgcttaccgtttctggagttgctcttttgtgccacctacgcagc
ccattttcctacgtatctggttcagtgctgcatcaggatgatatagctgagtttaatctc
caaactcaagctcagagcgcaaaggttacagcggtaacagcgaagccaggatgtattgtg
attggtcggcaagatgggtccatctgttcttacagtcttggcaaattagccccaaactca
ccaggtttctcgaatgaactacgagatgatgctgggattggacgtttatggactctcatg
tcaagaacaaagactgtgggtcctgtgcaggacatagtagcaactgttgtaaatgaaagg
gacctgttatttgttcttcatttggatggacacttgcgcatatgggataatcacatgaaa
cttctcaactataatgtccactcaaatgacattgaaggccatccgtccaggctatgggtt
ggtaaggctgatgatgatcaggagttgatatctttggcgattctgcatcaaaacactgtg
gttcaaggttgtgattatgttgctgtatatggcttcggtttttctgctgcggaaaggttc
atgttctcttctgaaccttcaatttctactatacctttgctagaggggaagcttgcggac
ttgaaaatagccacatataagctttggatacttaaagaatttggctccatgctctatgaa
atattacagtatgacattgacaccgaaactgcaaaatgttgtagtgagaaggtttgctgt
tatgtgctacaagaagatgctatcagtgaacagttgtttcaaagttctgacaatgcattg
gatgatttggtttggacagctgattcaatgttctcctccttgaaggaacaggcttttact
ttgatttcatccatgtttctgcggaggctacttcaaccaggagtaaaccactgttctgcc
ctacgtgaaaccttactagagcataaaaggttcctatcagattctgagttccagtcactt
acagcaaatgggctacgaaaagagatattatctattatagaacaagagggaagttcacag
acagcaagtgctacagcttatcactggaaacaattctctgcacggtacctccacaattgg
tgctggcacaataagccctatggattgtttcttgatactacaaatgaagtgtttggttta
gtaagaaagggttcattttctctattccgttgtttggagggtctggagatgcttatttat
ggttatgaccatggggtgaacttactcgacgatgtgtctgattttgaactcctcaatgag
gtcctcagatgcatgggcaatatacaccatttgctggggagatcttccacagcagcatat
tatgaatccttaattagttctattatatcatctgatgaaattgtttcacatatagtaaag
attctagagactggttttagtcatcagtcatcctcatccctcagtacattactaggaatg
gatacttatgtagaaagaaggcaggcagctcacaaaagtcaaaggaagttttctgttgag
atgttacgatcttttcatacgttgcaatcaagatcagcatcctggtcggcagtattcgat
gtgattgagaagtttatgaagtgtttgaacacaaacatgaacgtacaatcgtatggatca
aagagagtttgtaatgtaaattctgtgttactagttcaagctacttcacaggttgccaga
acaatgtttgagtgtgcatttgatctgtttctgttccttagctatctggttggtgttggt
gggcaggtttctttgttgcaaaatgatgttgccagaataaaactgaagctgttcccaatg
attcaagacatattgggacaatggattgttctccattttgtaggaacctcaccaacctca
ccaccaaccattgacgattttagctatcaactttcttctcttcagcttggtaaatcagat
gaactgtctttgcacagaaagcttggctgctctgattttacattggcttctttacttgat
tttccaaaatctcctgaaggggacgttatgtcaccttgttttctcggtccagcggaaata
ataaatctagtaaggaggtttagtagtttgattatgcatggaggaaattttgaatgtgta
cacactttcttgggatgcacaattaatctatcagctgttctcatcagacatagtcagtat
gaagctgctcagaatctgctgggaattctggaaacatacttgaacaatggaaaagtatcg
catactggtcaagatgcagacactgcatgttcagcatatcttcatctcaatggattttgc
cttctgatgattgcacatgatgaagcaaatattattttgagagaatccaaggttcatgat
gctatccgatgctttttcagggctgcatccgggtatgaagctccaaaggctttggagaac
ttttcattggaaacagggtttcaagtttctggggaatctagatctatttctttgtggaga
cttaactactatgagtgggcaatgcaaatttttgagcaacactccatgagcgagggggcg
taccaatttgctcttgctgcactagaactagttgatatcgtcgacgggatagataatgga
attgaagctgagggtcttccagagaccgcagcaatgattaaaggacgactatgggctaat
gtattcaagtacagcttggatttgaaacactttcacgatgcatattgtgcgatcgtctca
aacccagatgatgatagcaaatatatctgtttgaggcgtttcatcatagttctttgtgat
cttggggagacaaaggttctttgtgacggagagattccattcactggcttggtagagaaa
gtggagcaagagctcttctggaaggctgagcgctcagatctgtcgtctagaccaaatctc
tataaggttctttattcatttgaagcacataggaacaaatggaggaaagcagctgcatac
atgtacaggtactttgttagattgaatagagaaggtaatgcaggcggcagccaccaactt
cctcacgtgttgcaagagaggttgcatgctttatctgctgctatcaacgcattgcagctt
gttgatccctcatttgcatggctcgattctatttgtgaagccgatgataaaatttctcca
agtaaaagaccccggaatcttttgatggagaactcggcttttggcacaaactcagaactt
tctagattgcaattttgtgttgacattgaaatccttgaaaaagaatacatattaacagaa
gcacagtatatgctcagcactttgaaatcaagttttgatttttcagaaagccaatctatt
gagtccctgatggatattcttataaatgagaaattgtatgatatagccttcacaattgtg
ctaaaattttggaaggagtcagaaataaaaaagcaattggaccgtgtattttcagtcatt
gcgcagcaatgctgctcgaacagatcagacaacaaatcaagtaaacaagtgccacttctg
ccttcttctgagaatgatgcatgggagatcaacaataggagtattgctgtgacccaacaa
ttgcaggggagcaaccactgggaaacccttgaactatatttggataaatacaaagacctg
catcctaggttgccagtcattgttgctgagacgcttctttatactgatcctgagattgag
ctaccactttggttggttcagatgttcaaggctaataaggcagggaacaagatctcatgg
ggcatgtctggaaaagaggcagatcctgctgctttattcagattgtacataaactacgga
cgccacgcagaagccaccaacctgctggtggagtatctagagtcgttcgcatcgtcgagg
ccagtggacgtcctccaccgcaagaagatgtccgccgtttggttcccctacaccgccgtc
gagaggctctggtgccagcttggtgagatgcaacgggcagggcacagcgtggatcagtgc
gaccggctcaagaagctgctgcacggagccctgatgagccacctgcagcaggtcgtggtc
gactcggatgatgtgctgtcgtcagttggagatgggcaggggatggaggaccagagcagc
tga
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integrated database retrieval system
