Zea mays (maize): 100501884
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Entry
100501884 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100501884
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100501884
Membrane trafficking [BR:
zma04131
]
Protein recycling
Others
EARP complex
100501884
Endosome - Golgi transport
Tethering complex
GARP complex
100501884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
RINT1_TIP1
Vps54_N
COG4_N
DUF7084
COP9_hel_rpt
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
100501884
NCBI-ProteinID:
NP_001183452
UniProt:
C4J6Q6
LinkDB
All DBs
Position
3:170296873..170307521
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AA seq
835 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMHKIHEIKTKAEQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEASAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKKILKSHVFSD
FSSLGTGKETEDSMLLQQLSDACLVVDALEPSVREELVKNFCSKELTSYRQIFEGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRAQLVDILNNLKEKPDV
ATLLLAFQRTIEFEEELAEKFSGGTTNARNKETTSDDEDEGGGHNKIVSDIRKKYEKKLA
APSDEDKDKQKDLSVPGAGFNFHGIISSCFEPYMTVYIELEEKSLVDQLEKLVQEERWEI
EEGSQTNILSSSMQVFLVIRKSLKRCSALTKNQTLFNLFQVFQRILKAYAAKLYARLPKG
GTGIVAAATGTDGQIRTSDRDERMICYIVNTAEYCHQTSGELAENVAKMINPQFADKVDM
SEVQDEFSAVITKALMTLVHGLETKFDAEMVAMTRVPWATLESVGDQSEYVNGISSILSS
SIPVLGTLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTILLD
IPALGKQSTGAASYSKFVSREMGKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRILD
LKGLKKADQQAILEDFNKHAPAPAPAIKHPAVAPTVATPVATASVQIVPSVATPAVSITP
SMASLKGALANQEDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgctctcgaatacatcaaccagatgttccccactgaggcgtcgttg
tcgggcgtggagccgctgatgcaaaagatacagagcgagattcgcagagtggacgccagc
atccttgctgctgtccgacagcagagcaactcgggaaccaaggccaaggaagaacttgct
gctgcaacaaatgctgttcaggaattaatgcataagatacatgaaataaaaacaaaggct
gagcaaagtgaaactatggttcaagaaatctgtcgcgacatcaaaaagttggattgtgct
aagaggcacataacaactacaataaccgctcttcaccgtcttactatgcttgtttcggct
gttgagcaacttcaggttatggcatcaaaacggcagtataaagaagcatctgcacagctg
gaggcagtgaaccaactatgcagtcattttgaagcctatagagatgtgcccaagataaca
gaattgagagagaaattcaagaacatcaagaaaatcctcaaatctcatgtattttcagat
ttttcaagcttaggaactgggaaggaaacagaagattccatgctattgcagcagctatct
gatgcttgtttggtggttgatgcattggaaccatctgtaagggaagaactagtgaagaac
ttttgcagcaaggaactcacctcatataggcagatctttgaaggagcagaacttgccaag
ttagacaagaccgaaagaagatatgcatggattaaacgtcgactaaggtcaaatgaagac
acctggaaaatatttccaccttcctggcatgtcgactatctgctgtgtatccagttctgt
aagattacaagggcccagcttgttgatatccttaataatctcaaagaaaaaccagatgtt
gcaactttgttattggcgttccagagaaccattgaatttgaggaagaattggcagagaaa
ttcagtggtggaactacaaatgctagaaataaagagacaacaagtgatgatgaagatgag
ggtgggggacacaataaaattgtttcggacatacgaaagaaatatgagaagaaattggct
gcacccagtgatgaggacaaagataagcagaaagatttgtcagttcctggtgctgggttc
aactttcatgggatcatatcttcttgttttgaaccatatatgactgtatacattgaactt
gaggagaaatctttagtggatcaattagaaaaacttgtccaggaagaaagatgggaaatc
gaggaaggaagtcagacgaacattctatcaagcagcatgcaggttttcttggtgattaga
aaaagcttaaagaggtgcagcgcattaacaaagaaccaaacattgttcaacttatttcag
gtatttcaaagaatactcaaggcctatgcggctaagttatatgccagattaccaaaaggt
ggaactggtattgttgcagctgccactggcactgatggacagatcaggacctcagacagg
gacgagagaatgatatgctacattgtcaacactgctgaatattgtcatcagacatcaggt
gagctagctgagaatgttgctaagatgattaaccctcagtttgctgacaaggtggacatg
tctgaagttcaggatgaattctcagccgtgatcacaaaagcactaatgactcttgttcac
ggacttgaaaccaaatttgatgctgaaatggttgcaatgactcgcgttccatgggctacc
cttgaaagcgttggtgatcaatcagaatatgtgaatggtatcagctctattctgtcaagc
agtattcctgtgcttggtaccctgctttcacctacctacttccagtatttcctggacaaa
cttgcagcatctcttgggcctcggttttatctcaacatatacaagtgcaaacatatatca
gaaactggtgcacagcagatgcttttggacacccaagcagtaaagactattctcctagac
atcccagctcttggaaaacagagtacaggtgcagctagctactcgaaatttgtcagccga
gaaatgggtaaagccgaagctctacttaaggtcattttgtcgccagttgattctgtcgct
aacacataccgtgccctccttcccgaaggcacgcctcttgagtttcagcggatacttgac
ctcaagggcttgaagaaagcagaccaacaagctatcctggaggacttcaacaaacacgcc
cctgcaccagcccccgccatcaaacaccctgccgttgctccgacggtggcgacaccagtt
gccacagcatctgtccagattgtgccctcggtggcaactccagctgtttcgattacacca
agcatggcctccttgaagggagcactggcgaaccaagaggacgtcctcgcccgagctgcc
gcccttgggcgcggagcagccaccacgggcttcaagaggttccttgcattgacagaggcc
gccaaagatcgcaaggatgggccgttccgcaagctcttcaacgcctaa
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