Zea mays (maize): 100502129
Help
Entry
100502129 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100502129 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100502129
09122 Translation
03013 Nucleocytoplasmic transport
100502129
03015 mRNA surveillance pathway
100502129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100502129
03041 Spliceosome [BR:
zma03041
]
100502129
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100502129
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
100502129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
100502129
NCBI-ProteinID:
XP_008653362
UniProt:
A0A1D6IKB0
LinkDB
All DBs
Position
7:176134116..176148232
Genome browser
AA seq
694 aa
AA seq
DB search
MLTYPILNDRSIDQWTVTELKDELERRYLPVSGSKDELLKRLFEAMQDEILDGEGKTTVV
TSPPEELKGGETPGSIDVSVNQASIEQHVHKGASEVAKQGVGLVISVTEAYDESTFATSE
VTQEAVVGTAEVSQRSLDAVAEVESCLVDAAATDEPDGNGQGSASSGDTIVKEGSPRSEG
HGNTIEKTPEDGTNKKIAVDDEPSDLTGGDIKLGLDVHSKILKLEDEPAPPHDMLHNHED
SDVVAVAEPEDDTSKKMISDDVPTGLMHTNVELGAKVDCKIEQEEVSTLSDAAALHSYPK
EHIVAVAKGLALPRRMLMSGYTSNIDLDRKEESPDINSCEKLNLNRSSGDESMDEDVMER
KHADSYIKPEDLRGKTKVTSEHVFKDVSLLDTRAEGSPAHSKEVVTEEKLSTPTEKRKLE
DQEVIENNEPIKRQYLWNEDAVNISDQQASKITSTGTQKEVICPAPERSFGRPNTVARRN
SPKERIVPPAKTSATTSLRIDRFVRPFTLKAVKELLGKTGSICSFWMDEIKTHCYVTYSS
VEEAVATRNAVYDLQWPSNNNNYLIAEFVDPEEVKLKLETPPSQIPPISLSTATAQQTAT
FQQAMANQTLVPPHVPATSRGLLPTPARFAKVPPTSDPGPARESLPPPPLSLEPARTLDE
LFKKTQTYPRIYYMPLSEEEVSAKRAAHDKGRRG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatatcctatattgaacgaccgatcaattgatcagtggacggttactgagttg
aaggatgagcttgagcgaaggtatctgcctgtcagtggttcgaaggatgagcttttgaag
agactctttgaggccatgcaggatgagatacttgatggtgagggaaaaacaactgttgta
acttcccctcctgaggaattgaaaggtggtgaaactcctggttccattgatgtatctgtt
aaccaggcttcaattgagcaacatgttcataaaggtgcttccgaggttgcgaaacagggg
gtaggtcttgttatctctgttacagaagcttatgatgaaagtacatttgctacttcagaa
gttactcaggaggctgtggttggtactgcagaagttagtcagagaagtttggatgctgtt
gcagaagttgagtcttgtctagttgatgcagctgcaactgatgaacccgatggtaatggt
caaggttcagcttcaagtggtgatactatagtgaaggaaggaagtccgcgctctgaaggt
catggcaatactattgagaagaccccagaagatggcaccaataagaaaatagctgtcgat
gatgaaccttctgaccttactggtggtgacatcaagttgggcctcgatgtgcacagcaag
attctaaagctggaagatgaacccgcacctcctcatgatatgttgcataatcatgaggat
tctgatgttgttgcagttgctgagccagaagatgacacaagcaaaaaaatgataagtgat
gatgtaccgactggtcttatgcataccaatgttgagttaggtgccaaggtagactgcaaa
attgaacaggaagaagtatcaacattgtctgatgctgctgcattgcattcttatcctaag
gaacatattgtggctgtggcaaaaggccttgcgctcccaaggaggatgctgatgtcaggc
tacacaagtaatatagacttggacagaaaagaggagagtcctgacataaattcttgtgag
aaactgaacttaaataggagttcaggtgatgaatcaatggatgaggatgtgatggaaagg
aagcatgccgattcctatatcaaacctgaagatcttagaggaaagacaaaggttacttcg
gagcatgtgtttaaagatgtttctctgcttgatactcgtgctgagggttcccctgcacac
tcaaaggaagttgtcactgaagagaagctatcaactccaactgaaaagaggaaacttgaa
gatcaagaagtcattgaaaataatgagccaatcaaacgccagtacctatggaacgaggat
gctgtcaatatttctgatcaacaagcatccaaaataactagtactggtactcagaaggaa
gttatttgtcctgctccagaacgttcttttggcaggcctaatacagtagcaagaagaaat
tctccaaaggagcggattgtaccacctgccaaaacatccgcaacaacttctttaagaatt
gatcggtttgtgcgcccatttactctgaaagctgtgaaagaacttcttggtaaaactgga
tccatctgcagtttttggatggatgaaatcaagactcactgctatgtcacatactcttca
gtggaggaagctgtggccacgaggaatgctgtctacgacctccagtggccctcaaacaac
aacaattatctgatcgctgaatttgtcgatccagaagaggtaaagctcaaacttgaaact
ccaccatctcaaattcctcctatcagtctgagcacagctacagcacagcagacagcaacc
ttccaacaggcaatggctaaccaaactctagtacctccccatgttcctgctacttcgaga
ggtttattgcccactccagcacggtttgccaaggtgcctcccacctctgaccctggacca
gcaagggagagccttcctccccctccactgagcctggaacctgcccggacactggatgag
ctcttcaagaagacacagacgtacccaaggatttactacatgccactgtcagaagaggag
gtatctgctaaacgtgcagctcacgacaaaggtagaaggggatag
DBGET
integrated database retrieval system
