Zea mays (maize): 100502300
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Entry
100502300 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100502300
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100502300
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100502300
Factors involved in mRNA localization
Other mRNA localization factors
100502300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
100502300
NCBI-ProteinID:
NP_001350190
UniProt:
A0A804LDH8
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All DBs
Position
1:9483448..9565910
Genome browser
AA seq
1285 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIKEGKEMTSLLYTYRSCVKALPQLPDSMKHNQADLYLETYQVLDMEMSHLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSTQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKINRLLNVFKNDPVI
PAFPDLHLSPAAILKELSSYFQNFSSQTRLLALQAPHEIQGRELQDYQRHYLILNHMGTI
RADHDDFSIRFASAMDQMIRLKSSDGVYNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPISDSQQNSMTCFDYEKVVRYNYTAEERRALLELIGYIKSIGLMMQHCDTLVS
EALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMASTSKADPEQHS
LHQETEEMRQNTFYPRPVAPTAAQIHCLQFLICELVSGGNLRKVGGLFGNSGSGIPVEDL
KQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVGH
VIESEDAGLLESILIPFDLYNDSAQHALTSLKQRFLYDEIEAEADLCFDLLAQKLNEIIF
TYYKSCAASTLLDSSFTYACDDGDKYFVKPLRFDAIFKLRRVMVLGRTIDLRSIITQRMN
KIFRENIDFLLERFENGDLCGVVELQQLLDILELTHQSISRFLELDSYSLMLSEMQENLS
LVSYSSRISSQIWSEMQTDFLPNFILCNTTQRFVRSAKGTHHSSHRSSASTGKPYFYCGS
HDLTMAYQGLAGLYRDFFGVPHMFAVVKLLGSRSLPAIIRALLDHISSKITGLLPKINAL
QEALPKSIGLLSFDGGIAGCQKIVHEILTWEAKSEVKTEVLHDLKEIGSALYWMSILDIV
LRQIDTTQFMQSAPWLGLVPGNDGQVKHAYSDNTPFTTLLSAASNAVTSSPTCPNPSTFL
VMSKQAEAASLLYKSNLNSGSVLEYALAFTSAALDRHYSKWSATPKTGFIDITTSKDFYR
IFSGLQYSYLEDSINNPSKKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFLNVAEV
ESATVSHYQSSERTKSSNFLQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKVACAIKP
SGAPLHRMKFMNTVSAFETLPQRVT
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggccatccccgttgaggaggccatcgccgccctctccaccttctcgctcgaggatgag
caaccggatgtgcaggggttagctgtgctcctgtctagtgaaagatatgcgactaacagt
cctattgagtacagcgatgttgctgcttatcgtctatcactaggagaagatacaaaagca
atcaaccagctgaatacactgatcaaagaaggaaaagaaatgacatctttgctgtacaca
taccgtagctgtgtaaaagctctacctcagctgcctgattcaatgaagcataatcaagca
gacttgtatcttgaaacctatcaagttcttgacatggaaatgagccatttacgtgaaatt
cagagatggcaagcttctgctgcttctaagttagcggctgacatgcagagattctctagg
ccagagagactggttaatggacccacaatcactcatttttggtctatgcttaagttgctt
gacgtcctactgcagcttgatcatctcaagaatgcaaaagcaagcataccaaatgatttt
tcatggtacaagagaacgttcactcaagtaagcacccagtggcaggatactgacaccatg
agagaagagctggatgatcttcagatttttctgagcaccagatgggccatcttgttaaat
ttgcatgctgagatgtttcggacaaataccgttgaggatattctacaggttcttatagta
ttttgtgtggagtcattggaattggactttgctcttctttttcctgagcgccatacccta
cttcgtgtcctcccagttttggttgtcctagcaacctcatcagagaaggagagtgagtca
ctttataaaagggtgaagataaatcgtcttctcaatgtttttaagaatgatccagtgatc
ccggcatttccagatctgcatctttctcctgctgcaattttgaaggaattgtcatcatat
tttcaaaatttttccagtcaaactcgtctccttgctcttcaagcgcctcatgaaattcag
ggtcgtgagctacaagattatcagaggcattacttgattttgaatcacatgggaactatc
agagctgatcatgacgacttctctatacgttttgcctctgctatggatcagatgataagg
ttgaagtcatcagatggtgtgtataatgactggtcccgcgatatcaaagggaacatgtat
gatattgttgttgaaggcttccagcttcttagtcgttggactggcaggatttgggaacaa
tgtgcatggaaattctctcgccctatttcagattctcaacaaaactccatgacatgtttt
gactatgaaaaggtagtacgctataactatactgctgaagaacgaagggctctgcttgaa
ttaattggttacataaagagtattggattgatgatgcagcattgtgatactttagtgtct
gaagctttgtgggaaacgatacacatggaggtccaagattttgtacaggataaacttgat
actatgcttcgtacaacatttagaaagaagaaggacctttcccggattctctctgatatg
cggaccctctcagcagattggatggccagcactagtaaagcagacccagagcagcactcg
ctacaccaagaaactgaggaaatgagacaaaacacattttacccaagaccagttgcacca
acagctgcacagattcattgtttgcaatttcttatatgtgaacttgtatctggtggtaat
ctgagaaaagttggaggactatttgggaatagtggctctggcatacctgtggaagatctt
aaacaactagagacatttttctacaagcttagttttttcttgcatattttggattataca
gcgactattggtactctaactgatcttggatttctttggttcagagaattttaccttgaa
tcttctcgtgtcattcagtttccaattgaatgctcgctcccgtggatgctggtgggccat
gtcattgaatcagaagatgctggtcttctcgaaagcattttgattccatttgacctgtac
aatgactctgctcaacatgcactaacttctctcaagcagagatttctttatgatgaaatt
gaagctgaggctgatctttgcttcgatcttcttgctcagaagcttaatgagatcatcttt
acatattataagagctgtgcagcaagtactcttcttgatagttcatttacatatgcatgc
gatgatggtgacaagtattttgtcaaacctttgcgattcgacgcgattttcaagttaagg
agagtaatggttttagggaggacaattgatctaagaagcataattactcagagaatgaac
aaaatattcagggaaaatattgactttctacttgagcgctttgaaaatggagatctttgt
ggtgttgtggaactgcaacaactgctggatattttggagcttacacaccaatcaatatca
agatttcttgaattggattcttactctcttatgcttagcgagatgcaagaaaatctttcg
ttggtttcttattcaagtcgcatctcttctcagatatggagtgagatgcagacagatttc
ttgccgaatttcatcttatgtaataccacacagcggtttgtccggtccgcaaaaggaact
caccactcttcgcatagatcaagcgcttctactgggaaaccttacttctattgtggatca
catgatttgaccatggcataccagggtcttgctgggctgtaccgtgacttttttggagtc
cctcatatgtttgcagttgttaaacttcttggttccagatcattacctgcaatcatccgt
gctttactggatcatatatcaagtaagattacaggtttgctaccgaaaataaatgcactg
caagaagcattaccaaaatctattgggcttctttcatttgatggtggtatagcaggttgc
caaaagatagttcatgaaattttgacatgggaagcaaaatctgaagttaaaactgaagtt
cttcatgaccttaaggaaattggaagtgctttgtattggatgagcattctggacattgtg
ttgagacaaatcgacactacacagttcatgcagtcagctccgtggctaggattggttcca
ggaaatgatgggcaagtgaagcatgcctactctgataatactccatttaccacactttta
agtgctgcctctaatgctgtgacatcaagccctacatgcccaaatccatctacgtttctt
gtcatgtcaaagcaagctgaagctgcgagtctgctgtacaaatcaaacctcaactctggt
agtgtgctggagtatgctcttgcattcacaagtgctgccctggatagacactatagcaaa
tggagcgcaactccaaaaacaggctttatcgacattactacttcaaaggatttctatcgc
atttttagcggtcttcagtatagttacttagaagatagcattaacaatccttcgaagaaa
caagaaatgctgggtgattctgtagcctgggctggctgtacgataatgtacttactggga
cagcagcagcacttcgagctttttgatttctcctatcaatttctcaatgtggcagaagta
gaaagtgcgacagtatcacactatcaatcttcagagaggactaaaagttcaaatttcttg
caaggctacgagggcatcctggaagcgatgaggaaggctaggaggctcaataaccatgtt
ttctccatgttgagggcacgatgtccccttgaggacaaggttgcatgtgctatcaagcca
agtggggcaccgcttcaccggatgaagtttatgaacaccgtttctgcattcgagacattg
ccacaaagagtcacctaa
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