Zea mays (maize): 100502533
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Entry
100502533 CDS
T01088
Name
(RefSeq) cryptochrome 2
KO
K12118
cryptochrome 1
Organism
zma
Zea mays (maize)
Pathway
zma04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100502533
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
100502533
NCBI-ProteinID:
NP_001183937
UniProt:
C9DQ39
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Position
4:128872727..128876827
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AA seq
643 aa
AA seq
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MTASQSSMSGGGEPGVRTVVWFRRDLRVEDNPALAAAARTAGEVVPAYVWSPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGACRLVTRRSSDAVVALIDLVRSTGATHLFFNRLYDPL
SLVRDHRVKEQLSAEGITVQSFNADLLYEPWEVLDDDGFPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLSRCPWDELIFEDESEKGSNALLARAWSPGWQNADKALTAFLDGPLVDY
SANHKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNDGDRAGEESCTLFLRAIG
LREYSRYLTFNHPCSLEKPLLSHLRFFPWVVDEVHFKVWRQGRTGYPLVDAGMRELWATG
WVHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPIV
ELDAANSRLQGALSEMWELEAASCAAIENGMEEGLGDSTDEPPIDFPQELRMEVDRQPAQ
PAIIHTPVVAGWRREDQRVPSMTSSLIRAETELTADFGNTSEDSRPEVPSNIHLQARAER
EETVDGATGNTVRVNGNQQQQNLQNNMHRVLGQQDGKWIISAV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcgcagtcctcgatgagcggcggcggggagccgggggtgcggacggtggtc
tggttcaggcgagacctgcgtgtggaggacaacccggcgctggcggcggccgctcggacg
gccggggaggtcgtgccggcgtacgtgtggtcgccagaggaggacgggccctactacccc
ggcagggtgtcccggtggtggctcagccaaagcctgaagcacctcgacgcctcgctccgc
cggctcggcgcctgccgcctcgtcacccgccgctccagcgacgctgtcgtcgcgctgatc
gacctagtccgcagcaccggcgccacccacctctttttcaaccgactctacgacccgcta
tcgctggtccgggaccaccgcgtgaaggagcagctgtcggcggagggcatcactgtgcag
tccttcaacgccgatctgctgtacgagccgtgggaggtcctcgacgacgacggcttcccc
ttcaccatgttcgcgccattctggaacaggtgcctgtgcatgccggaccctgccgcacca
ctgctgccgcccaagaggatcaattcaggtgacctgtcgaggtgtccgtgggacgagctc
atctttgaagacgagtccgagaagggcagcaatgcgctgctcgcacgagcgtggtcacca
gggtggcagaacgctgacaaggcgctaacggccttcctcgacggtccgctggtcgactac
tccgcgaaccacaagaaggccgacagcgccagcacgtccctgctgtctccgtacctgcac
ttcggcgagctcagcgtccgcaaggtcttccaccaggtgcggatgaagcagctgatgtgg
agcaacgacggcgaccgcgccggcgaggagagctgcacgctattcctccgcgccatcggc
ctgcgggagtactcgaggtacctcaccttcaaccacccctgcagccttgagaagcccctt
ctgtcgcacctcaggttcttcccctgggtcgtcgatgaggtgcacttcaaggtctggaga
caagggaggactggctaccctcttgtcgacgctggcatgagggagctctgggccaccggc
tgggttcacgaccggatacgtgtcgttgtctctagcttcttcgtcaaggtgctccagctg
ccatggcgctggggcatgaagtacttctgggacaccttgctggatgctgaccttgagagt
gacgcactaggctggcagtacatttctgggtctctccctgatggccgtgagcttgaccgc
attgacaaccctcagtttgaagggtacaagtttgatccgcacggggagtacgtacggcga
tggctaccggagctggcgaggctgccgacggaatggatacaccacccctgggatgcacct
gagtctgtgcttcaggctgcaggagtcgagctaggctccaactacccacgccccattgtg
gagttagatgcagccaattccaggttgcagggtgccctgtcagagatgtgggagcttgag
gcagcctcttgtgctgccatcgagaacgggatggaagaaggcctcggcgattccacagat
gagccgccgatcgacttccctcaagaattacggatggaagtggaccgacaaccagctcaa
cctgctatcatccacacgccggtagtggctggttggagacgagaagaccagagggtgcct
agcatgacttcctcgttaattagagctgagaccgaactcactgcagactttggcaacacc
agtgaggacagtaggccagaagtgccgtcaaacattcatctgcaggctcgggcggagagg
gaagaaacagttgacggtgccactggcaatactgtcagggtgaatggcaaccaacagcag
cagaatcttcagaacaacatgcaccgcgtgctaggacaacaggatgggaagtggataatt
agtgctgtgtga
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