Zea mays (maize): 103625908
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Entry
103625908 CDS
T01088
Name
(RefSeq) WD repeat-containing protein PCN isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
zma
Zea mays (maize)
Pathway
zma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103625908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zma03009
]
103625908
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103625908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Gbeta
Pep3_Vps18
EIF3I
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Hira
Beta-prop_SCAP
Tricorn_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
103625908
NCBI-ProteinID:
XP_008644529
UniProt:
A0A979HJ24
A0AAJ8WYD3
LinkDB
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Position
5:complement(8942226..8947312)
Genome browser
AA seq
815 aa
AA seq
DB search
MDKLRVHRCTGDAVEWSPSPIVALAASPCASQVAAAREDGSLELWLVSPGSVGWHNQLTI
QGNAASRVTSLVWGRRGGVTGRLLSSSIDGSVSEWDLFHLQQKTVLDTVGVPIWQMAIEP
LDDAKNTENNSSEFAVNGHTNQNDSSDSDFSNIDDGDNSEDEDGSTNTRSSYHGNDFQRM
ALACDDGSVRLFNVPDSGALTYYRFLPRVSGRSLSVTWSSNAKFVFSGSSDGLIRCWDST
SFHEMYRITAGLGGAGTSPELCIWTLLFLRCGTIVSGDSTGSVQFWDSRHGTLLQAHSYH
KGDVNALTTVPGENRVFSAGSDGQVILYKISKDEFGATKNVVKEQVHKWVYVGYVRAHTH
DVRALTMAVPICREDTSPEEKVVKIRRREKHEFSYHKWAHLGVPMLISGGDDTKLFAYSA
REFTQFAPHNFCPAPQRPLIKMARDSTVNGDSVMLVQSPNWLDILLVTVQNKLTTPSTSS
SRGDATVRQLARLKSKGSRKIISSAASANGTLLAYSDGVRPCLFALRHKGGKKYTLDKLE
LPKGLPCSQSMAFTVDSSNLILAGRNGKIYIIDIATREISNVFHPTRKADGAKISRESPI
TKMFLSADGQWLAAVNCYGDIYVFNLEVQRQHWFISRMNGGSVTSGGFCPKNNTLVITTS
KNEVYVFDVEAKQLGEWSKRYTHQLPRSFQEFPGEVIGLSFPPQSSSSVVVYSTRAMCNI
DFGLPVVEDVGLPNGSGAPAEKADAKKSKKTRQKRKARDEESTEEKRNNFNFFAFKEPVL
FVGHLQDSSILMVEKRWMDVVEGFSAPVDRHIYGT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctccgcgtccaccgctgcaccggcgacgcggtcgagtggtccccctctccc
atcgtcgcgctcgccgcctctccctgcgcctcccaggtcgccgccgcgcgtgaagacggc
tcgctcgagctctggctcgtctccccgggctccgtcggctggcacaaccagctcactata
caaggcaacgccgcgtcgagggtcacatcactggtgtgggggcggagaggtggagtgacc
ggccggctgctctcgtccagcattgatgggtcggtgtccgaatgggatctctttcacctg
cagcaaaagactgttctagatactgttggagttccaatctggcaaatggccatcgaacct
ttggatgatgctaaaaatactgaaaataatagctcagagtttgctgtcaatggtcataca
aaccaaaatgactccagcgattctgactttagtaacattgatgatggtgacaactctgag
gatgaagatggttctaccaacacaagatcttcatatcatgggaatgatttccagcgaatg
gctcttgcatgtgatgatggttctgtacgattgtttaacgtgcctgattcaggtgcattg
acttactatagatttcttcccagagtgagcgggcggtctctcagcgtgacatggagtagt
aacgccaaatttgtattttctggcagcagtgatggtttaatcagatgctgggattcaaca
tctttccatgaaatgtatcgtattactgctggattaggaggggctggtacctcacctgaa
ctttgcatctggacactattgtttctgaggtgtggaactattgttagtggagatagtacc
gggagtgtacagttttgggatagccgccatggaacacttctgcaagctcactcctatcat
aaaggcgacgtgaatgcactaacaactgtgcctggtgagaacagggtattttccgcaggg
tccgatggccaggtaattttatacaaaatatcaaaagatgaatttggtgctactaaaaat
gtggtcaaagagcaagttcacaaatgggtctatgtgggatatgtgagagctcacactcat
gatgtaagggcactgaccatggctgtacctatctgtagagaagatacatcacctgaggaa
aaggtggtgaagattcgccggcgtgaaaaacatgaatttagttaccacaaatgggctcat
cttggtgttccaatgcttatatctggtggtgatgacaccaagctgtttgcatattcagca
agagagtttactcagtttgcacctcataatttctgccctgcacctcaacgccctttgata
aagatggctagggatagcacagtcaatggagattctgtaatgcttgtccagtctccaaac
tggttggatattttacttgtgacagttcagaacaaattgacgactccaagtacatcatca
tctagaggagatgctacagtccgacaacttgctcgtttgaaaagcaaggggtccagaaaa
atcatttctagtgctgcctctgccaatggaacacttttggcctattcagatggtgtgaga
ccctgcctctttgcactaaggcataagggtggaaagaagtatacccttgacaaattagag
ctaccaaaaggattgccctgttctcagagtatggcgtttacggttgattcgtccaatttg
atacttgcgggacgtaatggaaaaatatacatcattgacattgcaacaagagaaatttca
aatgtatttcaccctacaagaaaggcagatggagcaaaaatctcaagagaatcacctata
acgaagatgttcctaagtgcagatgggcaatggctggctgcagttaactgctatggcgat
atttatgtatttaatcttgaggtgcaaaggcaacactggttcatatcccgaatgaacggt
ggttctgttacatctggtggattttgccccaaaaacaacacacttgtgataactacatct
aaaaatgaggtgtatgtatttgatgtggaagcaaaacaattaggcgaatggtccaagcga
tatacacaccagttgcccagaagtttccaggaattccctggagaggtcattggcttatca
tttcctccgcaaagctcatcgtcagttgttgtatacagtaccagggctatgtgcaacatc
gatttcggattgccagttgttgaggatgttggcttgccaaatggatcaggtgcaccagca
gagaaggcagacgcaaaaaagagtaaaaaaacaaggcagaagcgtaaggcccgtgatgaa
gagtctacagaggagaaaaggaacaacttcaacttctttgcgtttaaagaaccagtgctc
tttgttgggcatctacaggacagttcaattttaatggtagagaagcgatggatggatgtt
gttgaaggtttcagcgcaccagttgacagacatatatatggcacatga
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integrated database retrieval system
