Zea mays (maize): 103626041
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Entry
103626041 CDS
T01088
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103626041
09124 Replication and repair
03420 Nucleotide excision repair
103626041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103626041
03400 DNA repair and recombination proteins [BR:
zma03400
]
103626041
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103626041
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103626041
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103626041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
103626041
NCBI-ProteinID:
XP_008644643
UniProt:
A0A1D6GLH1
A0AAJ8WYP5
LinkDB
All DBs
Position
5:complement(17431023..17443756)
Genome browser
AA seq
1229 aa
AA seq
DB search
MEDDEYEDGMDMGYGGHHQRGGGHAGYGAEEDDEMGYGEGGGDGDEMEEEADGDAEQQED
ITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE
FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD
CEEVTETAEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL
IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY
IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC
ALSRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI
KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI
SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD
YGRCSRPLFIVEGQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEEEETTMISM
TINDLQNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEEFGRPNRENTMGMRHGSYDKLDDDGL
APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTALRHSESGMVDQVLLTTNADG
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR
MTIGQLIECIMGKVAAQMGKEGDATPFTDVTVDNISKALHKCNYQMRGFETMYNGHTGRK
LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
LLFQELMAMAIAPRMLTHDMKTGKDQKKR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgagtacgaggatgggatggacatgggctacggcgggcatcaccagcgc
ggcggcggccacgcggggtacggcgcggaggaggacgacgagatggggtatggcgagggg
ggtggggacggggacgagatggaggaggaggcggatggggacgccgagcagcaggaagat
atcacgcaggacgacgcctgggccgtcatctccgcctacttcgaggagaagggcctcgtg
cgccagcagctcgactccttcgatgagttcatccagaacaccatgcaagagattgtcgat
gagtccgccgacatcgagatccggcccgagtcgcagcacaaccccggccgtcaggccgag
tttgccgagactctgcacaagatcagctttggtcaaatctatctcagcaagccaatgatg
actgaagccgatggagagacagctactttatttccaaaatcagcaaggctcaggaacctg
acatactctgctccactgtatgttgatgtgtcatacagagtaatgaagaaaggacatgac
tgtgaggaagttacagagactgctgagtatccaaaagtgtttattgggaaggttccaatc
atgttgcgttctagttactgcacactgtatcaacagtctgagaaggatctcactgaactt
ggggagtgtccttatgatcaaggtggttatttcattatcaatggaagcgaaaaggtcctt
attgcccaggagaagatgagcaccaaccatgtctatgtttttaagaagaggcagcctaac
aaattcgcatatgtggctgaagtccgctccatggctgagaaccagaacagaccagccagc
agcatgtttgtacggatgctttcacgagcaggagcaaaagggggatcatctggtcaatat
atccgtgctactctgccttatattcgagcggacattcccattattattgtatttcgagca
ttaggatttgttgccgacaaggatatactggagcatatatgttatgacttttctgataca
caaatgatggaattgctacgtccatccctggaggaagcttttgtcattcaaaatcaacag
gttgctctggactacattggaaagcgtggcgcaacagttggtgtcactcgagaaaagaga
attaaatacgcaaaggaaatacttcagaaggaaatgttgcctcatgttggtgttggggaa
ttctgtgaaactaagaaggcatactattttgggtatattattcaccgcctactgatgtgc
gctcttagtcgaagagctgaggatgaccgagatcattatggaaacaaacgactagatctt
gctggtccactgcttggagggctgtttagaatgcttttcaggaagttaacaagggacgtg
agatcttatgtgcaaaagtgtgtagataatggaaaggaagttaatttgcaatttgctata
aaagcaaaaactattaccagtggtttgaagtactcccttgctactggaaactggggacag
gctaaccaagctggaaccagagcaggggtttctcaggtgctcaatcgcctgacctatgct
tctacactttcacatctccggaggcttaactctcccattgggcgtgaaggaaaattggca
aaaccccgccagttgcataattcgcattggggaatgatgtgtcctgctgaaacaccagaa
ggacaagcttgtggcttggtgaaaaatcttgccttgatggtatatatcactgttggttct
gccgcaaatccaattttggaatttttggaggagtggggcacagaaaattttgaggagata
tcaccagccgtcattccacaagctgctaaaatttttgtcaatggttgttgggttggaatt
cataggaaccctgacctgttggttaagactcttagacgtttaagaagacagattgatgtc
aacactgaagttggtgtggtgcgtgatatccgtcttaaagaacttcgactctacacggat
tatggacgctgcagtcgtccattgtttattgttgagggccagaggctgctcatcaagaag
gcgcatatccgagccttgcaacaaagggagactcctgatgaaggctggcatgaattggtc
tcaaaaggatatatagaatacatagacactgaagaagaggagactaccatgatctccatg
accataaatgaccttcaaaatgcaaggcacaacccagaggaggcttactctgaaacttac
acgcattgtgagattcatccttcattgatacttggtgtttgtgcgtcgattatacctttt
cctgatcacaaccagtcacctcgtaatacatatcagtctgctatgggaaagcaagccatg
ggaatttatgtcaccaactaccaattaaggatggacacgttggcctacgttctatactac
ccacaaaagcctctagttactactcgtgctatggaacatttgcacttcagacagttacca
gctggcattaatgcaattgttgctattgcttgttattctggatataatcaagaagattca
gttattatgaatcaatcttccatagatcgtgggttctttcggtcactatttttccgctct
tacagagacgaggaaaagaagatgggcacacttatcaaagaggaatttggtcgtccaaat
agggaaaatactatgggaatgcgccatgggtcatatgataaactagatgatgatggcctt
gcaccacctggaacaagggtctcaggggaagatgtcattattgggaagacatctcctatt
ccacaagatgacgctcaagggcaagcttctagatactcaaagcgtgaccatagtactgct
ctgcgtcacagtgaaagtggcatggtagatcaggttctgttaacaacaaatgcggatggt
ctaagatttgtcaaggttaggatgcgatctgttcgcataccacaaattggcgacaagttt
agcagcaggcatggacaaaaaggaactgttgggatgacttacactcaagaggatatgcca
tggacaatcgaaggcattacacctgatattattgtgaatccacatgctattccatcccgt
atgactattgggcagctgattgagtgtattatgggtaaagttgctgctcagatggggaag
gaaggcgatgccactccattcacggatgtgactgtggataacatcagcaaagctcttcat
aaatgtaattatcaaatgcgtggatttgagacaatgtacaatggtcacactggaagaaaa
ctgactgcgatgattttcctgggccccacatattaccaaagactcaagcacatggtggat
gacaagatacattcgagaggacgtggtcctgtgcagatactcacccggcaaccagcagag
gggcggtctcgtgatggaggtctccgctttggagaaatggaaagggattgtatgatcgca
catggagcagctttcttcctgaaggaaaggctgtttgaccagagtgacgcatacagagtc
catgtatgcgagaaatgtggtctcatcgcaattgctaacctaaagaaaaactcgttcgaa
tgcaggggctgcaagaacaagactgacattgtccaagtacacataccctatgcttgtaag
cttctgtttcaggagcttatggcaatggccattgctcccagaatgcttacccatgatatg
aagacagggaaggatcagaagaagcgctga
DBGET
integrated database retrieval system
