Zea mays (maize): 103626282
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Entry
103626282 CDS
T01088
Name
(RefSeq) zinc finger CCCH domain-containing protein 45
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103626282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103626282
03019 Messenger RNA biogenesis [BR:
zma03019
]
103626282
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103626282
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103626282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
Nitr_red_bet_C
Motif
Other DBs
NCBI-GeneID:
103626282
NCBI-ProteinID:
XP_020393907
LinkDB
All DBs
Position
5:complement(43943942..43957817)
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AA seq
640 aa
AA seq
DB search
MDDGDGGLSFDFEGGLDSAPAAGGPVPSSTDPGAGGGDGPGMHGRGRGRGSYRQTVCRHW
LRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDDVKECNMYKMGFCP
NGPNCRYKHIKLPGPPPSVEEVLQKILQMRSFNRYSQNRNSNYNQQGERPQHPQGSALPN
QNSAENATAAAPPAGGQQAQTLNQQPPQQQQKPNTNDQAQGVSNGHQATRIATPLPQGPS
RYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESTENVILIFSINRTRNFQGCAKM
TSRIGGYIGGGNWKSAHGTAHFGRNFSMQWLKLCELSFQKTHHLRNPYNDNLPVKISRDC
QELEPFVGEQLASLLYLEPDSELTAMLIAAEAKREEEKAKGVSADEAADNQDIVLFDDNE
EDEEEESEEEEGNAQESQGRGRGRGMMWPPQMPMMRGAMLAGRGFPPNMMGDGFGFGGGF
GMPDPFGMPRGFPPFVGPRFPGDFARGPMPGMGFPGRPPQPFPLGLDMMMGPGRGPLMGG
MGMGGPGRPNRPMGMAPFMPPPPPNNRAAKREQRRPGGDRGDRFETASALDQGSRGHDNT
GNPGADGARAQSGDRYGRSALRDDDSESEEEAAPRRSRKR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgacggcggactgagcttcgacttcgagggcggcctcgactctgccccg
gcggccgggggccccgtgccgtcctccactgaccctggcgcgggaggcggcgacgggccg
ggtatgcacgggcgcggccgaggtcgcgggagctaccgccagacggtgtgccgccactgg
cttcggggcctatgcatgaagggcgaggcgtgcgggttcctgcaccagttcgacaaggcc
cgcatgcccgtctgccgtttcttccgcgacttcggcgagtgccgcgagcccgactgcgcg
tacaagcactcgtacgacgacgtcaaggagtgcaacatgtacaagatggggttttgtccc
aatggtcctaattgccggtacaagcatatcaagctacctgggccaccgccttctgttgag
gaagttcttcagaagattttgcagatgcgctcttttaacagatacagtcagaatagaaat
agtaattataatcagcaaggggagaggccacaacatccacagggttctgcgttgcctaac
caaaactcagcagaaaatgctactgctgcagctccaccagctggtggacaacaagcacaa
acgctgaatcaacagccaccacagcagcagcagaagccaaatacaaatgaccaggcccaa
ggtgtttcaaatggccatcaggccactagaatcgccacaccccttccacaaggaccatct
aggtatttcattgttaaaagttgcaatcgggagaatctggaaatatcagttcaacaagga
atttgggccacacagaggagtaatgaggctaaactcaatgaagcttttgaatccactgag
aatgttattttgatattctcaattaatagaactcgcaatttccaggggtgtgcaaagatg
acttctaggattggtggctacattggtggtggaaattggaaatctgctcatggaacagcg
cattttggtcggaacttctctatgcagtggcttaagctttgtgagttgtcatttcagaaa
acccatcatctccgaaatccatacaatgataacctccctgttaagatcagcagagattgc
caggaactagaacctttcgttggtgagcagttggcttctctgctttatctggagccagac
agtgaactcacggctatgctaattgcagcagaggccaagcgagaggaggaaaaagcaaag
ggagtgagtgctgatgaggcagctgataatcaagatattgtgctgtttgatgacaatgaa
gaggacgaggaagaggaaagcgaggaggaagaaggcaacgcccaagagtctcaaggaagg
ggaagaggaagggggatgatgtggccgcctcaaatgccgatgatgcgtggggcaatgttg
gcagggcgtggcttccctcctaacatgatgggtgatggctttggttttggcggcggtttc
ggcatgcctgatccatttggcatgccacgcggcttcccgccattcgttggcccaaggttc
cctggtgactttgctagaggcccgatgccagggatgggtttccctggcaggcctccgcag
cctttccctctgggtcttgacatgatgatgggtcctggccgtggtccgctgatgggaggc
atgggaatgggtgggcctggacggcctaatcgtcccatgggtatggcgcccttcatgccc
ccgccacctccaaataaccgtgctgcgaagcgggagcagagaaggccagggggtgaccga
ggggacaggtttgaaacagcatcagcattagaccagggcagcaggggccatgataacact
ggaaaccctggagcagatggagccagagcccagtctggagacaggtacggtagaagcgcc
cttcgggacgatgacagcgagagcgaagaggaggccgctcccaggcgatcaaggaaacga
tag
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