KEGG   Zea mays (maize): 103626493
Entry
103626493         CDS       T01088                                 
Name
(RefSeq) lysine-specific demethylase 5B isoform X2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
zma  Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:zma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zma01009]
    103626493
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zma03036]
    103626493
Enzymes [BR:zma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103626493
Protein phosphatases and associated proteins [BR:zma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103626493
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103626493
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID PHDvar_NSD KDM5_C-hel PHD-1st_NSD PHD_5 zf-HC5HC2H CEP15-like
Other DBs
NCBI-GeneID: 103626493
NCBI-ProteinID: XP_008645132
UniProt: A0A1D6GXB1
LinkDB
Position
5:67393043..67424359
AA seq 1875 aa
MGKGAPPAVATATSVPEAPVFHPTDEEFADPLAYVARIRPLAEPYGICRIVPPSSWSPPY
ALDFKALSFPTKRQPIHRLLARPAPADPDTFLLDYRRFLGASSAHRRGRRKGLPKSPSLS
DGRPLDLCRLFHAVKRFGGYYGACEGKRWGDVVRLVDDKAPMHISECAKHVLAQLYYEHL
YGYEKFANPQHGNKGRKQPRPGSDDRPSVSRSQDEESNISVTGEMVEEVTGRKRRNFSRK
ELGRGTSHGRYGRVVNITGNNVASAVAQKRTRRNSDAVVTTVDEVSAGVRKRKRRKSDAA
STVFNDEVDQVCEQCSSGLHGDVMLLCDRCDKGWHLYCLSPPLERVPPGNWYCSDCLNSD
RDCFGFIQRRKSCLLETFRRFDDRVRKRWFGQRNPSRIQIEKQFWEIVEGKAGELEVMYG
SDLDTSIYGSGFPRLGDTVPSSMDLETWQKYCSSPWNLNNFPNLPGSVLRTVKDKIPGVM
VPWLYIGMLFSSFCWHVEDHCFYSINYLHWGEPKCWYGVPGAKANAFEQVMRQALPDLFD
AQPDLLFHLVTMLNPSILQANSVPVYSVMQEPGNFIITFPRSFHGGFNLGLNCAEAVNFA
PADWLPHGGIGANLYRLYRKAPVLSHEELLYVVAKNGVDAESLTHLKGEIKRLFINERRR
RVELWINGTVKSSLMLPRINPNFIGSEEDPTCIICRQYLYLSAVSCNCRLSSYVCLEHWK
HLCECSPKKHCLLYRHTLAELGDLVCEVSLVSPQRDNVMQNPHLLNDVYVPSKKVKDHYI
LYRQLAEDWVSNSEHILQMPFVERSYATALEEAEQFLWGDHAMDSVRNITVRLTKAMKWA
LGVRKCLSKIQDFLKDGCSEKVNYVEIEELVATKCAPCCEPSLTKLQAYAEEAKLLINEV
NNALSSFLTVDKLETLYSRVSEFPVKLTESSTLFWELSSAKSWLKKASDCLEQNKLGIID
IDVLNKLKSEIIQLRVLLPEIDLISKLWKDVESWQTRCQLYLQDFPDLKELEGFLLAADG
ANFSIPELNILKQHYSNCCSWVSRAKNILRKLYATSDYHNAVEELTGILKEAELLGVKVD
ELPIVEKELKRSLCRKQASEALATVMPMEVVEEILKEASILHIEEEQPFDDLSRMLKEAT
SWEEKARLILERSASLSEFEDHMRCSEGIRVILPSKLHMKAEVDIAKLWIDKCQAYLRPG
CNKLAFGDFLKVDDIKDLINQPANLKVILDTSELNSVLNNIEKWEHSSLSLLNNFRALLH
LNSIGSTVDTLQRKLEELQGKMNTEIEVGLSLGFEFKVLWELKDSSLMLRWILNALSLCC
MIPLLQDVDRLIEEAVHLPASLADCSLVTLLMRALSCLRKSLILLPGSGTSAKSKLEDVE
NILAEFKEVDVPYPIMTAKLEDAVNNHNSWIEQCNTFFMLSDGQSWAMLQNLRDNGQSVA
FDCPEMDKVVDEVKNVEEWLNQCHCTLLLDGNNSSLLSILVKIRGLLDDVCTLYAEDCMK
LRLCAVCSCDIGDRLASRCVTCQDWYHGSCVENLSATTQTTIEWMCSFCSLLQSEDQLKN
QLSVKMSKGNCPALAALDELISSAKGLYTGIEEINLLKEIVDKARNLNAYLMQILDDSDC
YHGEDLTVIFKSLLVALKATSASGLYDDNVSCRIESVLSRYLWKKQIHKLLYGGKKSSIQ
EVLCLDEEGSHLEICDQDFFKLEISKIKETSLQWLAKAEEVACDSGELALDLVYGLIAEG
ENLSVDFEKELKLLRDRSVLYCICCKPDDNRAMIACDQCDEWYHFDCINLLGPPPESFFC
PACHPNNGEESVSLARSEDDEDRSSTGAGAHTPPDRVVERDLIKLLSCHSGSSWSESRRA
PHRTARRRSSFVGLL
NT seq 5628 nt   +upstreamnt  +downstreamnt
atgggcaaaggggcccctcctgccgttgccacagccacctccgtccctgaggcgccggtc
ttccaccccacagacgaggagttcgccgaccccctcgcctacgtcgcccgtatccgcccc
ctcgccgagccctacggcatctgccgcatcgtcccgccgtcctcatggtccccgccttac
gccctcgacttcaaggctctctccttccccaccaagaggcagcccatccaccgcctcctc
gcccgccccgcccccgctgaccccgacaccttcctcctcgactatcgccgtttcctcggg
gcttcctccgcacatcgccgtggccgcaggaagggccttcccaagtcgccctctctctcg
gatggtcgcccgctcgacctctgccgcctgttccatgctgtcaagcgcttcggcggttac
tacggtgcctgtgaggggaagcgctggggcgacgtcgtccgcctcgttgatgataaggcg
ccaatgcacatatcagagtgcgccaagcacgtgcttgcgcagctatattacgagcatctc
tatggctatgagaagttcgccaacccacagcatgggaacaagggaaggaagcagccacgg
cccggatctgatgatcgaccatcggtttctcgttcacaggacgaagagagcaacatatct
gttactggggagatggttgaggaggttacaggccggaaaaggagaaatttctcacgcaag
gaattaggcagagggacatctcatggtcgttatggccgtgttgttaacatcactggaaat
aatgtggcatctgctgttgcccagaagcggacgaggaggaactctgatgctgtggttacc
acagtcgatgaggtgtctgctggtgtccggaagcggaaaaggagaaagtctgatgccgcg
tctaccgtgtttaatgatgaagtggatcaagtttgtgagcagtgtagtagtgggttacat
ggggatgtcatgctcctatgcgatcgctgtgataaaggctggcatttgtactgtttgtcg
ccgccgctcgagcgagtgcctccagggaattggtattgctcagattgcctcaactccgat
agagattgttttgggtttatccaaaggaggaagtcctgcttgcttgagactttccggcgg
tttgacgacagggtgagaaagagatggtttgggcagaggaatcccagccgtattcaaatt
gagaagcagttctgggagattgtggaggggaaggcaggggaacttgaggttatgtatggg
agtgacttggacacttcaatttatgggagcgggtttcctcgtcttggtgatacagtgcca
tcatctatggacctagagacgtggcagaaatactgttcaagcccgtggaatttgaacaat
tttccgaatctgcctggctcagttcttaggacagtcaaggataaaattcctggtgtcatg
gtcccatggctctacatagggatgctgttttcgtcattttgttggcatgttgaggaccat
tgtttctattcaataaattatttgcattggggtgagccaaaatgttggtatggggtgcct
ggagcaaaagcaaatgcctttgagcaggttatgcgccaggccttacctgatctgtttgat
gcacaaccggatctgctttttcaccttgtcacaatgctgaatccatctattttacaagca
aatagcgttccagtatatagcgtgatgcaggaacctggaaacttcatcatcaccttcccc
aggtcattccatggtggcttcaatttaggtttgaactgtgccgaggctgtaaattttgcc
cctgctgattggttacctcatggtggaattggggctaatctatatcgtttataccgcaaa
gcgcctgtcttgtcacatgaggagcttctgtatgtggttgcaaagaatggtgtggatgct
gagtcacttacccatttgaagggagaaataaaaaggctttttataaatgagagaagacgt
cgagtagagctttggattaatgggactgtcaaatctagcctaatgttgccaaggattaat
ccaaactttatcggaagtgaagaggatcctacatgcattatttgtcgacagtatctgtat
ctttcagcagtctcctgtaactgtaggctgtcttcttatgtttgccttgagcactggaag
cacctttgtgaatgcagtccgaagaagcattgcttactttatcgacacacccttgcagag
ttgggggatttagtgtgcgaggtctctttggttagcccccaaagggacaatgttatgcag
aatccacacttgctcaatgatgtttatgtgccgtctaaaaaggtcaaagatcactatata
ttatatagacagcttgcagaagattgggtttcaaactctgaacatattctccagatgcca
tttgtggaaaggtcttatgccactgctttggaagaagctgaacaatttctttggggtgat
catgccatggattctgtccggaacataacagtaagactaacaaaggctatgaagtgggcc
ttgggtgttagaaaatgtctctccaaaattcaggactttctgaaagatggctgctctgaa
aaagtaaattatgtggaaatagaagaactagttgctacgaaatgtgccccgtgctgtgag
cctagtcttacaaaattgcaggcgtatgcagaggaagcgaaattgctgattaatgaagta
aacaatgcactatcatctttcttaacagtagacaaattggaaacattatactcaagggtt
tcagaattcccagttaagctaacagaatcatcgactttgttttgggagttatcttctgca
aagtcctggttgaagaaagcaagtgattgccttgaacagaataaactgggcattatcgac
atagatgtcctcaataaactaaaatcagagataatacaacttcgagttctacttccagag
attgatcttatctcaaagctgtggaaagatgtggaatcatggcaaacccgttgtcaatta
tatctccaagacttccctgatctaaaggagctggagggttttctccttgctgcggatggt
gccaactttagcattccagagctgaacattcttaagcaacattactcaaattgttgctct
tgggtgagtcgtgctaagaacatactcagaaaactttatgctacgagtgactatcacaat
gctgttgaggagttgacaggcattctgaaggaagcagaattactaggagtaaaagttgat
gaattgcctattgtggagaaagaactaaagaggtccttatgtaggaagcaagcatctgag
gcacttgcaacagtaatgccaatggaggtggttgaagaaattttaaaagaagcttcgata
ctacatattgaagaggagcaaccatttgatgatctgtctcggatgctcaaagaggccact
tcctgggaagagaaggctagacttattcttgaacgatcagcttctctctctgagtttgaa
gaccatatgaggtgttcagagggaataagagttatccttccgtctaaactgcatatgaaa
gcagaggttgatattgctaaattgtggatagacaaatgtcaggcctatttgagaccaggc
tgcaataaacttgcatttggagactttcttaaagttgatgatatcaaggatttaatcaat
cagcctgcaaatttgaaagtcattcttgacacttcagaacttaattctgttctcaacaat
attgaaaaatgggaacacagttcactaagtctactcaataattttagagccttacttcat
ttgaatagtattggctctacagttgacacacttcaaagaaaattggaggagctgcaaggt
aaaatgaacacagaaatagaagttggattatctcttggttttgagttcaaggttctttgg
gaactgaaggattcttcgttgatgctaagatggatattgaatgcactgtctctgtgctgt
atgattcctttattgcaggatgttgatagattaattgaagaagcagtccaccttcctgct
tccttagcagattgttctttggttacattgttgatgagggcattgtcttgtctaagaaaa
tcacttattttgcttcctggttctggaacatctgcaaaatccaaattggaagatgttgaa
aatattctagcagaattcaaggaggttgatgttccttatcctatcatgactgccaagctg
gaggatgctgtaaacaatcataattcatggatagagcaatgcaataccttcttcatgctg
tctgatggccagtcgtgggctatgctgcaaaatctcagggacaatgggcagtctgttgca
tttgattgccctgagatggataaagttgttgatgaggttaaaaacgttgaagagtggctc
aatcagtgccactgtactctacttctagatggaaataatagttctttgctctccatactt
gtaaagataagaggattattggatgatgtttgcacgttatatgctgaggattgtatgaag
ttaagattatgtgctgtatgctcatgtgacatcggagataggctggcatctagatgtgtg
acttgtcaagactggtaccatggctcctgcgtggaaaacctgtctgctactacacaaacg
acaattgaatggatgtgttcattttgttcacttttacagagtgaggaccaattgaagaac
caactatctgtaaagatgtctaaaggaaactgccctgcacttgccgcacttgatgaactc
atctcttctgcaaagggtttatacactgggattgaggaaattaatttgctaaaagaaatt
gttgataaggctcgtaacttgaatgcctacttgatgcaaattctggatgattcagactgt
tatcatggagaagatcttactgtcatattcaaatctcttttagttgctctcaaggcgaca
tcagcttctggcttgtatgatgacaatgtcagttgcagaattgagtctgttttgagcaga
tatttgtggaagaaacaaatacataaactattgtatggtggtaaaaagtcatcgattcaa
gaagtactgtgccttgatgaagagggttcacatttagagatatgtgatcaagatttcttc
aagttggagattagtaaaataaaggaaaccagcctgcagtggctggctaaagcagaggag
gttgcatgtgattctggtgagcttgcactggatcttgtgtatggacttatagctgaaggg
gaaaatctctctgtagactttgagaaggaactaaagttactgagggatcgcagtgtcctc
tactgcatctgctgtaagcccgacgataacagggccatgattgcatgcgaccagtgtgat
gagtggtaccattttgattgcatcaacctgcttggaccccctccagaaagcttcttctgc
cctgcttgccatccaaacaatggtgaagaatctgtatcacttgcacgctcagaggatgat
gaggatagatcaagcactggagccggagctcacacgccgccggacagagtggtggagcga
gacttaataaagcttcttagctgccatagcggtagctcatggagcgagagcagaagggct
cctcatcgaacagctagaaggcgtagtagtttcgtcggattgttatga

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