KEGG   Zea mays (maize): 103627197
Entry
103627197         CDS       T01088                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
zma  Zea mays (maize)
Pathway
zma03030  DNA replication
zma03410  Base excision repair
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103627197
   03410 Base excision repair
    103627197
   03420 Nucleotide excision repair
    103627197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zma03032]
    103627197
   03400 DNA repair and recombination proteins [BR:zma03400]
    103627197
Enzymes [BR:zma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103627197
DNA replication proteins [BR:zma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    103627197
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      103627197
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 103627197
NCBI-ProteinID: XP_008645717
UniProt: A0A1D6H8Z1
LinkDB
Position
5:167630117..167661898
AA seq 2208 aa
MSGRRGPAATGGGRGGGGGGGGNWRRSGSAKAKEQRLRLGAEELLESRLGFAPYTDGERR
LGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFRPYFYAATKDKMELEVEA
YIRRRYEGEISDIEIIEKEDLDLKNHLSGLKRKYLKLQFDTVQQLMRVRNDLLHVVEKNE
EKIDAVEAFESIHGVKRVERPQDYINYIIDLREYDVPYHVRFAIDNDVRSGQWYNVNVSG
SDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDNVMMISYMIDGQGYLIINREC
VGEDIDDLEYTPKPEFEGYFRVKNVQTELDLLKAWFSHMQEVKPGIYVTYNGDFFDWPFL
EKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAK
LGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDE
VLRKGSGTLCEMLLMVQAFKASVICPNKHQADLEKFYNNRLLESETYIGGHVECLETGVF
RSDLPTKFQLEPLAYEQLIGNLDRDLHYVIAVEGKLDIDSVTNYDEVKDAIEQKLVALRD
HPIREERPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRKLEWVWR
GETYMAKKNDYYHIKRQIESELIQSGGIASSKPFLDLSKPEHLLKLKDRLKKYCQKAHKR
VVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSMKIQ
EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEK
IGRPLELDTDGIWCVLPGSFPENFTFKTKAGKKLTISYPCVMLNADVARNNTNDQYQTLK
DPVNKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGFEIK
RRGELKLIKVFQAEVFDKFLHGSTLEECYSAVASVANRWLDLLDNQGIDIADSELLDFIS
ESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERAV
PVAIFETDPEIAKHYLRKWFRFSSDANIRSIVDWSYYKQRLSSAIQKIITIPAAMQKISN
PVPRVLHPDWLHKKVREKDDRFRQRKLRDIFSPLAKEEGLHNLNRTGDMEDLLISNKDLR
KNPSHGLDIDKENNPNGASVGSGLNISKKQQNCMTGLNVPCTSQIQNAASYETVDKGTDY
QGWLDAKKRKWKYVREQKKRRRLGAAATFDDPNALLSARHANQLPVNSRNRSTFFQKQEL
ALFRSHWQIIQLASSTVPGHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVK
KILPHGRPCFNLIEVVTTEEQFRAEGKKLAAHLAEPDVEGIYETKIPPELNAVLQIGCVC
KVDKSAKRRSIQDGWDLAELQMKTTAECSYLEQTFSFFYLYHSLSEGRAVYVFYFPTSFR
IHAVIVNPFRNKEISPSFLEKQFGDACQALGSVPENLSFHVDYQTSIDAGSKYAQRMLLE
YRQQHSGPVVGIIECPKLQAIKVAIRALDDLPCVTIPSNARDNNYQALGWQATAGRTSMQ
RCAASTQWFNERISLAKYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDDGIPDL
GGTYEGETCFADEVIQPALTYPGAYRRVSVELKIHHLAVNALLKSSQVDEMEGGSIGSFG
NDVPPGSNATETDFDDASLCIPAFQVLKQLIQRCISDAVSSGNVFADAILQHLYRWLCSP
RSKLHDPALHRLLHNVMKKVFALLLAELRKLGANVIFANFSKIIIDTGKVDLSSAHAYCD
SLLRTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKTQNVDSSDGDNDIDIVSSWN
MAEDLPKDTQDHFVLIVSEFLYIPWKFMKEQVAAQATIRDDTSCTPSVTIMAAENLEGQV
IEHLRDKISNYFADKLLRTVSDILHHFKGKSKHESDEPAKSDPHTHKGDAALEFIKHICA
VLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLC
RDSALQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLS
EQCSCGGSFRCKEEPSYFLSKMRVFLKVAVSQKFPLLQDCVQWILEAR
NT seq 6627 nt   +upstreamnt  +downstreamnt
atgagcgggcggcggggtccagctgccacaggaggcggacggggaggcggaggcggaggc
ggcgggaactggcggcggagcgggtcggcgaaggcgaaggagcagcggctgcgcctgggc
gcggaggagctcctcgagagccggctaggattcgcgccatacactgatggggagcggcgc
ctcggatggcttctcaccttttcaccgtcatcatgggaagacgaggacaccggaaaaatc
tacagctgtgttgacttatactttgtatcacaggatgggtctacgtttaaagtgaaatac
aagtttcggccttacttttatgctgcgaccaaggacaagatggagttggaagttgaggca
tatattaggcgacgttatgaaggggaaatttctgacatagaaataattgagaaagaggat
ttagatctgaaaaatcatctttctggcttgaagagaaaatacctgaagcttcagtttgac
accgtacaacaattaatgcgtgtaaggaatgaccttttacatgttgttgaaaagaacgaa
gaaaaaatagatgctgtggaggcatttgaatcaattcatggtgtaaaaagggtagaaagg
ccacaagattacataaattacatcattgatttgcgtgagtatgatgttccatatcatgtt
cgttttgctatagataatgatgtcagaagtggacagtggtacaatgttaatgtatctggt
tctgatgttttgcttcagagaagggaagacctgcttcagcgtgcagaagttcatgtctgt
gcatttgatattgagaccacaaaactgcccctgaagtttccagatgctgaatacgacaac
gtaatgatgatttcatacatgattgatgggcaaggatacctgataatcaacagagagtgc
gttggagaagacattgatgatttggagtacacacctaaacccgaatttgaggggtatttt
agagttaagaatgttcaaactgagttggatctacttaaagcatggttttctcacatgcaa
gaggttaagcctggcatttatgttacatacaacggtgacttttttgactggccattttta
gagaagagggctgcacaccatggaataaaaatgaatgaggagattggtttccaatgtgac
aataaccagggcgagtgtcgggctaaattttcttgccatcttgactgttttgcttgggtg
aagcgagacagttaccttccacaaggaagccaaggtctaaaggctgttacaaaagccaag
ctaggttacgatcctctggaggttaatccagaagatatggttcgctttgcaatggagcag
ccacagacaatggcttcgtattctgtatcagatgctgttgcaacatactatctatacatg
acttatgtccatcctttcatcttttctcttgcaaccataatacctatgtcacctgatgag
gtactgcggaaaggaagtgggacactttgtgaaatgctgctaatggttcaggcattcaag
gctagtgtcatttgtcctaacaagcaccaagctgatcttgagaagttctacaataaccgt
ttattggaaagtgaaacctacattggtggtcacgttgagtgtcttgaaactggcgtcttt
agatctgatctccctacaaagttccaacttgaaccattagcatatgagcaactcattgga
aatcttgatcgtgatctgcattatgtcattgctgtagaaggaaagttggatattgattct
gtcacaaattatgatgaagtcaaggatgccatagagcaaaagcttgttgcattgcgtgat
cacccaattcgcgaagaacgccctctaatctatcatctggatgttgctgctatgtatcca
aatattattttaaccaatagactccagccaccatccatagttacagatgtggactgcaca
gcatgtgatttcaatcgtcctggaaaaaattgcctcagaaagcttgaatgggtctggcga
ggagagacctacatggcaaaaaagaatgactattatcacataaagaggcaaattgaatca
gagctgattcaatctggtggcattgcatcgtcaaagccttttcttgacctctcaaaacca
gaacatttacttaaattgaaggatcgtttgaagaaatactgccaaaaggcgcacaaaaga
gttgttgataaaccaattactgaagtcagagaagcgggaatatgcatgcgtgaaaattct
ttctatgtagacacagtgcgtagctttcgtgatagaagatatgaatacaaaggtcttaac
aaaacatggaaaggaaaactcgcagaagcgaaagccagtggaaattctatgaaaattcag
gaagcgcaggatatggttgttctatatgattctttgcaacttgctcacaagtgcatattg
aattctttttatggatatgttatgcgcaagggagcaagatggtactctatggaaatggct
ggtgttgtaacatatactggtgcaaagattatccaaaatgctcgattacttgtagaaaaa
attggaaggccactggaactggatacagatggcatttggtgtgttttgcctggctctttt
ccagaaaactttactttcaagacaaaagctgggaagaagctaactatatcttatccctgt
gtcatgcttaatgctgacgttgcaaggaacaacactaatgatcaatatcaaacattgaaa
gacccagtaaacaagacatatacaacacacagtgagtgttccattgagtttgaggttgat
ggaccttacaaggccatgatcttacctgcctctaaagaggaagggattctgataaagaag
agatatgctgtcttcaatgaagatggcactttggcagaacttaaaggttttgaaatcaag
cgtagaggtgagctgaagctcataaaagtttttcaggcggaggtatttgacaaatttctt
catggttcaactttggaggaatgctattctgctgttgcctctgttgctaaccggtggttg
gacctactggataatcaaggaattgatattgctgacagtgaattgcttgatttcatatcg
gagtcgagcacaatgagtaaatctttagttgactacggagagcagaagtcttgtgctgta
actacagcaaaaagacttgccgaatttcttggagattcgatggttaaagacaaaggacta
cattgccaatatattgttgctcgggagccacaaggcactccagtgagcgagcgtgctgtt
ccggtagctatattcgagacagatcctgagatcgcaaagcattatttaaggaaatggttt
agattctcctctgatgcaaacattcgatctattgttgattggtcttactacaagcaacgc
ttaagttcagctattcagaaaatcattacaattcctgcagcaatgcaaaagatctcaaat
cctgttcctcgagttcttcatccagattggttacacaaaaaggtcagggagaaagatgat
cgatttcggcagcgtaaactgcgtgatatcttcagtcccttggctaaagaagaggggctg
cataacttgaataggactggagatatggaagatttattaatttcaaacaaggatttgagg
aaaaatccttctcatggtttagacattgacaaagaaaacaatccaaatggagcatcagtg
ggatctggtttgaatattagtaaaaaacaacaaaactgtatgactgggttaaatgttcct
tgcacttcacaaatccaaaatgctgcttcttatgaaacagttgataagggtactgactat
caaggatggcttgatgctaagaaaagaaaatggaaatatgtccgtgaacaaaaaaaacgt
cgaaggttgggtgctgccgccacttttgacgatcctaacgctttgctctcggccagacat
gccaatcagctacctgtcaacagtcggaatagatctacatttttccagaaacaagaattg
gccctctttagatcacattggcagataatccagcttgcttcaagtacagtgcctggtcac
ttttttgcgtgggttgttgctgaagggattatgttcaagattcctattaatgtgcctaga
actttttacctaaactcaaaggctcctgtcacagaagagtttccaggaaggcgtgtcaaa
aagattctcccacatggtagaccttgtttcaaccttattgaggttgtaacaactgaagaa
cagttcagggctgaaggcaaaaaacttgcagctcatctagcagagccagatgttgaggga
atatacgagacaaaaattccaccagagctcaatgctgttctccaaatcggatgtgtctgc
aaagtggacaagtctgcaaaaagacgaagtatacaagatggatgggatctagccgagttg
caaatgaaaacaaccgccgagtgctcatatctggaacagacattttcatttttctattta
taccacagcttgagtgaaggaagggctgtatatgtattttacttccccacgtctttccga
atacatgcagtgattgtcaatcctttccgtaacaaagaaatatctccgtcatttcttgaa
aagcaatttggagatgcttgccaagcccttggttctgtccctgagaatctgtctttccat
gtggactaccaaacatcaattgatgctggaagcaaatacgcacaaagaatgttacttgag
tacaggcaacaacattctggacctgtcgtaggcatcatagagtgccctaagctccaagct
ataaaggtagctatacgagcacttgatgatttgccatgtgtaaccattcctagcaatgca
cgtgacaacaactatcaggctcttggctggcaagcaacagctggccgaacaagtatgcag
cgttgtgctgcatcaacccaatggttcaatgaacggatttcactcgctaaatatgcacat
gtgccactgggtaattttgaactagactggcttctttttactgccgatgtattcttttca
agggcattgcgtgatcaacagcaggtactatggatatctgatgatggcattcctgattta
ggaggcacttatgaaggagagacatgttttgctgatgaagtcattcagcctgcacttact
tatcctggtgcatatagaagagtttctgttgagcttaagatccaccatttggcggttaat
gctctcctaaagagtagtcaagtggacgaaatggaaggaggatcaatcggtagctttgga
aacgacgtgcctccgggttcaaatgccactgaaactgactttgatgatgctagcttatgt
atacctgctttccaggtgctaaagcaacttattcaaagatgcatttcagatgcagtgtcg
tctggaaatgtatttgctgatgcaatattgcaacatctctaccgctggctttgcagccca
cgatcgaaacttcatgatccagctctccatcgtcttcttcataatgtgatgaagaaagtc
tttgctctattgttggccgagttacgaaagctgggggctaatgttatttttgcaaacttt
tctaagataatcatagatactggaaaagtagatttgtcatctgcacatgcatattgtgac
agcttattaaggaccttgcagacgagggacctcttcgagtggatagaattggaaccattg
cacttttggcattccttactgttcatggatcagtataactatggcggaattcaagctaaa
acacaaaacgtagactcttcagatggtgataatgatattgatattgtctcaagctggaac
atggcagaagatttgcccaaagatacacaggatcattttgtcttaatcgtatcagaattc
ctatatattccgtggaaattcatgaaggaacaagtagctgctcaagctaccataagggat
gatacctcatgcactccatctgtaacaatcatggctgctgagaatcttgagggccaggtg
atagaacacctccgtgacaagattagcaattactttgcagacaagcttctaagaactgta
agtgatatacttcaccatttcaaagggaaaagcaaacatgagtcagatgaacctgcaaaa
tctgatcctcacacgcataaaggcgatgctgcattggagttcattaagcatatctgtgca
gttcttgctcttgatcaaaatgttcagcatgatattttgagaatgaggaagaacctgtta
aagttagttcgtgtaaaggagtttgctccagaagcacaattccaagacccatgcgcctca
ttcactctgccaaatgtgatctgcagctattgcaacgattgccgggacctggatctctgc
cgcgactcggcactccagggccaggagtggagatgcgcggtgccgcagtgcgggcagccg
taccaccgcgagcagatggagaacgcgcttctgcaggtggtccggcagcgagagaggctg
taccacctgcaggacctggtgtgcgtgcgctgcaggcaggtgaaggccgcccatctgtcg
gagcagtgttcctgcgggggctccttccggtgcaaggaggagccttcgtatttcctcagc
aaaatgcgggtgttcctgaaggtggcggtgagccaaaagttcccgctcctgcaggactgc
gtgcagtggattcttgaagccagatga

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