KEGG   Zea mays (maize): 103627413
Entry
103627413         CDS       T01088                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103627413
  09124 Replication and repair
   03420 Nucleotide excision repair
    103627413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    103627413
   03400 DNA repair and recombination proteins [BR:zma03400]
    103627413
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     103627413
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103627413
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L PspAA DUF7718
Other DBs
NCBI-GeneID: 103627413
NCBI-ProteinID: XP_008645930
LinkDB
Position
5:188411432..188444747
AA seq 120 aa
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTMSQSSLTQAYTQAINDLDKELEYLKQAFEDEKNRYKDRMKQGF
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaatgcccctgaccgttatgagcgtttcgtcgtgccagagggcaccaagaaagtgtcc
tatgagagggatacaaagattgtgaatgctgcatcattcactgtcgaacgcgaggatcac
actgtaggcaatatcctccgcatgcagttgcacagagacccaaatgttctctttgccggg
tataagctccctcacccactccagtacaagatcattgttaggatccacacaatgagccag
tcctccctgacgcaggcctacacccaggctatcaatgatctagacaaagagcttgagtac
cttaagcaagcttttgaggatgagaagaacaggtacaaggacaggatgaagcaggggttc
tag

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