Zea mays (maize): 103627474
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Entry
103627474 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC103627474
KO
K28108
shortage in chiasmata 1
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103627474
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103627474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_PDDEXK_dom
SHOC1_2HhH
SHOC1_N
SHOC1_ATPase
SHOC1_HhH_tandem
Motif
Other DBs
NCBI-GeneID:
103627474
NCBI-ProteinID:
NP_001337250
UniProt:
A0A1D6HEK1
LinkDB
All DBs
Position
5:complement(193085503..193107315)
Genome browser
AA seq
1721 aa
AA seq
DB search
MRTRFLTADYFAPSPSAAASSDLAIALASLPFPSLPVPTLPPEPHLTPFPFSADFLPAVS
VAGDDLDSLPFDSAVTELLTAVIPQPLPVPDIPVADEGLDDYLYGRGVYGNAFSSTDPVA
FRVFKGLEDSHTNGDKEEGLNLEGSAVTKRGDLLEALFEVPELDFLSVLQKKIASFDDEE
PDACAGTYSFGVRDMKIIPDFIDIDTETRIPYAAEFAESIYQVEVPVKHDDDDNCPYAKD
SYCMEIIGLENGQIIPQLEVSMNSWELDECPAKTMISNFFHSIIEHLFDGAQVCLPSFGS
NEFLRPCDIDIFALVCKDAPLVEYQADKPITANDVAVMDFVRINDGILLDKKSALYPLKP
DGTCSHFPCFILFEEVKIIDFPSKDAFKSLVLIQSEKAEMNTSEEIFKDDFDQAKHFYES
VVSSELALVDDTFKSLPTPILHDDKAMRSMLPPIEEVLCSLKPLPLSAADGIYLDWHLLS
EGPCNRESCSTYESMVEEVKPCSLNSELQISGQQMPALDIGFLEDFPRSAKPQHEDKQNE
VYVPGPISHDPSANLEATQKNMLENVVRGHTHMDKLSSEKESSLFESTSQSNGLSFYLNV
RNGTNKVRKAEDISTLDIPSSKQAASISTRPKVNKLIEIHPVNLSDIIQGLINDIHVSYT
SALQESAYLRHSFSDGQGLSISKQKLLELITGEGSEGLYSCCKYEDKMELIVLYALKQVA
YYLCFFGLHAAYLYVGNLTGTFEIIPERLRHLQRCIGEARLKAEKQLQESHPSLSVIETI
LRSNTQIDQKILIVSDRAFWLPLGQKLTAMKITSVEFGTYHSTTYSDAVIETNSKRCMLQ
ELWKSDCILLDNKNIPASFPFSEFCMIVEYGGPNKSSILLSLAPKLDGLPPLHFLYVTVD
GEGLPNALVEDNHTDPDLKSTLDAALHTLQKDLQEKMNKMRIVDSLNFIPATNQQQHLQT
NHLTVDSSKKIPADVQLHNAGNLNEKNIVDSHNLVTATEQPNGLNQITIANLQNFVPVVE
KSSSTVVSANVIKAPQVNQSAGVLPLSEKMDSTKAGRLPGPEVAIVVNTGNHGKNMLFSR
RSSYQQILALERGGMQVVERDVDLPVDLILTAAVCLLWYDTRTSGSSELTISAGTSGITN
FLEDIATNVLMALSFCFCGCIMVFEGENHLLSAVMEASDSLYASAVNLDMNLQLFFSEMP
KSTDQIILNCIRNAVRINQALCPQITESESLVESFLTAFPSVSPLSAHMILSSGSLMDFL
RWSHEQRTQAVEKYHLPPQSISLFSALCKFGELGESKSVMTECSSVDSDISSTLLQSPRK
KKRRAAQDFSVAVSNPAFPNPCTQLHGDCVENDKIFSPPKLRKFFHIEDTMSDLPEVFMI
DQRLNMGSEGVSCQPRKYDVDAVTGINIIDDDFINELTPNFRTYNERTSSMVDTCNFSKQ
SELGAKQPIRSSFPASLPSVCTTSSHPTFPSALEINNDPGSWDVPCSINQTWAGHVHGDF
ATSSGRNDQGVRYHEPRQEIMQTPVPSLSFLKQDFGCHGASQGSGWEIDYLRRMNENRKA
CREQSRCSVSTQPNSRTRDGSSRILSAPPIESFRYERNKDAPFRDQNRSDIESFRYRRDI
NTLLRDQSPSNEVRRYGKGRGGTKAQSHRVRKDFKAQPSINHEKSIMPSIEPTWTPLDKR
ARQKLTFATYGNEKQSKLVWRHQSSPGVGCGFPKKYHEEGT
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcgcttcctcaccgccgactacttcgcgccgtcgccctcggctgccgcctcc
tccgacctagccatagcgctagcatcccttcccttcccttccctccccgtcccgactctt
cctcccgaaccccacctcaccccattcccgttctccgccgatttcctccccgccgttagt
gtagccggcgatgatctcgactcgctccccttcgactccgcggtgaccgagctcctcacc
gctgtcatcccgcagcccctgcctgtgccggatatccctgtcgctgacgagggcttggat
gattatctctacggtaggggtgtttacggcaacgcttttagctctactgatcccgttgct
ttcagagtcttcaagggactggaagacagccacacaaacggcgataaggaagagggcctc
aatttggagggctcagcagttactaagcgaggggacctgttggaggccttgtttgaggtt
ccagagctcgatttcctgtcggttttgcagaagaaaattgcatcgtttgatgacgaagag
ccagatgcttgtgccggcacctattcatttggtgtccgagacatgaaaatcattccagat
ttcattgatattgatactgagacaagaataccatatgcagctgaatttgcggagtcaatt
tatcaagtagaagtccctgtaaaacatgatgatgatgataactgtccttatgctaaagat
agctactgcatggaaatcataggactagagaatggtcaaataataccccagttggaggtt
agtatgaattcttgggagcttgatgagtgcccagcaaaaacaatgatatccaattttttt
catagtattattgaacacttatttgatggagcacaagtctgtcttccatcatttggctca
aatgagttcttgagaccatgtgatattgacatttttgccttggtttgcaaagatgcccca
cttgtggagtatcaagcagataaaccaattacagcaaatgatgtagcagtaatggatttt
gtaaggatcaatgatggtattttactggataaaaagtcagcattataccctctcaaacct
gatgggacctgttcacattttccttgcttcattctctttgaggaagtaaagatcatcgac
tttccttccaaggatgcctttaagtcacttgttcttattcagtcagagaaagctgagatg
aatacatctgaggaaatattcaaagacgactttgatcaagcaaaacatttctatgaatca
gtggttagctctgaattggctctagttgatgatacattcaaatcactacctacacctatt
ttacatgatgataaagcaatgcgatctatgcttccccctatagaagaagtactttgctcc
ctaaaaccacttcctctatctgcagcagatgggatttatttggattggcatcttttatca
gaagggccatgcaaccgggagagttgctctacttatgagagcatggttgaggaggtaaag
ccttgcagtttaaattctgaactacaaataagtggccagcagatgccagcgcttgacatt
ggttttctggaggattttccgagaagtgcaaagcctcaacatgaggacaagcagaatgag
gtttatgttcctgggcctatatctcatgatccatcagctaatttggaagcaactcaaaag
aacatgctagaaaatgttgttagaggtcatacccacatggataaattgagttcagaaaag
gaatcatccttgtttgagtcaacgtcacagtccaatgggctaagcttctacttgaatgtg
agaaatggcactaataaagtgagaaaagctgaggatatttctaccttagacatcccctct
tcaaaacaagcagcttcaatttcaaccagacctaaagttaacaaactcatagaaattcat
cctgtcaacctctcagatattatccaaggccttatcaatgacatccatgtaagttataca
tctgctttgcaagaaagtgcatacttaaggcattctttctccgatgggcaaggtttaagc
atttcaaagcaaaagcttcttgaactgataacaggggaaggttcagaaggcctgtatagc
tgctgtaaatatgaagataagatggagcttattgtactgtatgcattaaaacaggttgca
tattacctatgtttctttggtctgcatgccgcctatctgtatgtaggcaatttgactgga
acctttgaaattattcctgagaggttaagacatcttcaacgctgcattggtgaagctcga
ctgaaagctgagaagcaattacaggagtctcatccgtcattatctgtcatcgagacaatc
cttagatctaatacccaaatcgaccaaaagatccttatagtgtctgatagagctttctgg
ttgccattgggccaaaagcttactgcaatgaagataacatctgttgagtttggaacatac
cattcaaccacttattcagatgcggtgattgagacaaattctaaaagatgtatgctgcaa
gaattatggaaatcagactgcattctgctagataacaagaacatcccagcttcattcccc
ttcagtgaattttgcatgatagtggaatatggaggcccaaataaatcatctatcttgtta
tctctggctcccaaattagatgggttgccaccactgcatttcctgtatgtcacagttgat
ggtgaaggccttccaaatgctcttgtcgaggacaatcacacagacccggatttgaaatcc
acattggatgctgctttgcatacacttcagaaggacttgcaagagaagatgaacaaaatg
cgcattgttgattcattaaactttataccggcaacaaatcaacagcaacatttgcagacc
aatcatctcactgtggattcatcaaaaaaaattcctgcagatgttcaactgcacaatgcg
ggaaatctgaacgaaaagaatattgttgattcacacaacttagtgactgcaactgaacag
cccaatggcttgaaccaaataaccattgccaatttacaaaattttgtgcctgtagttgag
aagagcagttcgactgttgtatctgcgaatgtgataaaagccccccaagtcaaccaatct
gccggtgtccttcctctcagtgagaaaatggacagcaccaaagcaggaagattgcctggc
ccagaggtggcgattgttgtcaatactggaaatcatggaaaaaatatgcttttctctcga
agatcatcttatcagcagatactagctttggagagaggaggtatgcaggttgtagagcga
gatgttgatctgcctgtggatctaatacttactgcggcagtttgtttactatggtatgat
acaagaacctctggttccagtgagttaacaatatcagcaggcacatctggtataacaaat
tttctagaggatattgctaccaacgttctgatggcacttagcttctgtttctgtggctgc
ataatggtcttcgagggtgaaaatcacttgctttctgctgtaatggaggcatctgattct
ctatatgcttcagctgttaacctggacatgaatttgcagctattcttctcagaaatgccc
aaatcaacagatcaaatcattctcaattgcatcaggaatgctgttaggataaatcaggct
ctttgtccacaaataactgaatcggaaagtctggttgagtcatttctcacagcattccct
tcagttagtcctctgtctgcacacatgatactttcttctggcagtcttatggatttcctc
agatggtcacatgagcaacgtactcaggctgttgaaaagtatcatttgccaccgcagagc
atttctctcttcagtgctttgtgcaaattcggtgaactaggtgaatcaaagtctgtaatg
actgaatgctcttctgttgattcagatatcagtagtactttgctgcagtctccgaggaaa
aagaaaaggcgtgccgcacaagacttttccgttgcagttagtaatcctgctttccctaat
ccatgtactcaattgcatggtgactgtgtagaaaatgacaagatattctcaccacctaag
ttaaggaaattctttcacatagaggatacaatgtctgacctccccgaagtctttatgatt
gatcaacggttgaatatgggtagtgaaggtgtctcttgtcagccaagaaagtatgatgtg
gatgctgtaactgggatcaatataatagatgatgacttcattaatgagttgactccaaat
ttcagaacatacaatgaaaggactagcagtatggtggacacatgcaatttctctaagcaa
tccgaattgggagctaaacagccaatcagaagttcctttcccgccagcttaccatcagtc
tgtacaacttccagtcatccaacattcccatccgcattggagatcaataatgaccctggt
agctgggacgttccatgtagtataaatcagacatgggcaggtcatgtgcatggggatttc
gccacaagctctggcagaaatgatcagggtgtcagatatcatgaaccaagacaggaaata
atgcagactccagtaccttcactttcttttctgaaacaggattttggctgtcatggagca
tcacaaggctcaggctgggaaattgactatctaaggcgaatgaatgaaaacagaaaagca
tgccgagagcaatctagatgcagtgtttcaacgcagccaaattcaagaacaagggatggc
tcctcaagaattctgagtgctcctccaattgaatctttcagatatgaaagaaataaagat
gcccctttcagggaccagaaccgttcagatattgaatctttcagatatcgaagagatata
aacacgcttttgagggaccagagcccttcaaatgaggttcgtaggtatgggaaaggcagg
ggaggaactaaagcacagagccatagggtaagaaaggatttcaaggcacaacctagcata
aatcatgaaaagagcataatgccatccatcgagccaacatggactcctcttgacaagaga
gcgagacaaaaacttacatttgcaacatatgggaacgaaaaacaaagcaagctggtttgg
agacatcaaagcagccccggtgttggatgtggcttccctaaaaagtaccatgaagaaggt
acgtag
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integrated database retrieval system
