Zea mays (maize): 103627664
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Entry
103627664 CDS
T01088
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103627664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103627664
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103627664
mRNA degradation factors
5'-3' decay
Decapping complex
103627664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
WDR55
DSE1_N
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
ASA1
Motif
Other DBs
NCBI-GeneID:
103627664
NCBI-ProteinID:
XP_008646180
UniProt:
A0A1D6HIV9
LinkDB
All DBs
Position
5:complement(212136007..212146764)
Genome browser
AA seq
1341 aa
AA seq
DB search
MASPSGNPNPNPNTPFEIGKLFRPPNPMTTATPNPIFPGVAGGPTGSPPPSGPYSYPPVT
PPFHRGPYIHYQQDPHAMARPVVSFPMPNPNLNPNPNPNANPNAASPGPNPGARLMQLLG
NSGPTQLETAVSMPPPTSEFAQLQQLPAMPSAPPARMLSSTSSKVPRGRLLGTGERAVHD
VDSRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALR
ALLRGHTQRVTDMAFFAEDVHRLASASIDGRIYVWRIDEGPDEENKPQITGKIEIAIQIV
GEAEAYHPRICWHSHKQEILFVGIGNCVLRIDTTKVGRGKDFTVEDPVKCHLEKLVDGVR
LVGKHDGDVTDLSISQWMSTRLASGSKDGSVKIWDDRKQVPLSIFKPHDGQAVYSVAFLT
APERPNHINLITAGLLNREVKIWASTNEDGWLLPSDSETWKCTQTLELVSSLEPRVEEAF
FNQVAVLPQASLILLANAKKNAIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHDS
QPDSEQVVQVYCVQTMAIQQYGLELPLCLPPTADSTGFGRDPAISRVYEAPLEMAGTESS
TGTSFTDSYSVSSLSKPSTVDQSAELDLKPSAPPLAYSEGDGSVPLPSAPPAPKMEAPGS
GPAPGGRGIDQSAFDYTTNRNVERDVLKRQDTPMPIRKDILGKDEPRDGHSDVPMLPNPR
LMFQVGGNATHLVTPSEIISGTLSSSENNDASKSDGGKSQDVSSRSSQVPEVEPKHIDES
KQDQNLGLEAVKETQIVCENMEKTRSSLDQTVEMISERSVTTDKYSVEESQSSSDRPTSD
QTGISENVLKKFVEMPEKIDYSSASREQSSSFTKEEKVLHPQTSGQPSPPVSAFNSTESH
EPLSSTYLPITVSSYPEVGATQGMLQQLMGRQEDMEKQLSTVVPASIAKEGKRLETSLGR
TVEKSIKANIDAFWARLQEENTKREKADRDRMQQFVTLITSSINKDLPSNLEKSLKKEIS
SLGPVVARAITPIIEKCLTSAVSDSVQKGLGDKLFNQLEKSITGKLEATLARQIQIQFHT
SGKQALQDALRTSFESLLVPAFEQACKTMFEQIDGAFQKGMSEHSTAIQHQVESSHSPLA
LTLKEIINSASSITQSFSSELLDGNRKLLALVTSGNAMAHNTSALQPINGPMGGSQEVEA
PLDPMKELGRLISERKFDEAFTMALQRSDVSIVSWLCSQVDLRALCAMVPVPLNQGVLLA
LLQQLAIDIHNETSRKVQWMTDVAMAINPADQMIAVHVRPIFEQVYNQLAHQRTLPTMTA
ADGTSIRVIMHVINSVLLSYK
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccaagcggaaaccctaaccctaatcccaatacaccattcgagatcggaaag
ctcttcaggccaccgaatcctatgaccaccgcgacccccaaccccatcttccccggcgtc
gccggaggcccgacgggctcgccgccgccgtccggtccctactcctaccctccggtgacc
ccgcccttccaccgcggaccctacatccactaccagcaggatccccacgccatggcccgt
cccgttgtctccttccccatgccaaacccaaacctcaaccccaatcccaacccgaacgct
aaccccaacgccgcctccccgggccccaaccctggcgcgcgcctcatgcagctgctcggg
aactccgggccgacccagctcgaaaccgccgtctccatgcccccgcccacgtcggagttc
gcgcaactgcagcagctaccagcgatgccatccgcgccgccggccaggatgctgagcagc
accagcagcaaggtgcccaggggacggttacttggcaccggggaacgtgcggtgcacgac
gttgactccaggctgcctggggaagcgcagccaccgcagctggaggtaacaccgattacc
aagtacacatcggatccggggctcgtgctgggcagacagatcgctgtgaaccggacgtac
atcgtgtatgggctcaagctcggtaacatccgtgtgctgaacatcaacaccgcactccgc
gcgctcctccgtggtcacacacagagggtgacagacatggctttctttgctgaggatgtc
catcgtttggcaagtgcgagcatagatggacggatatatgtgtggagaatcgatgaagga
cctgatgaggaaaataaaccacaaattactgggaagattgaaatcgccatccagattgta
ggcgaggctgaagcttaccatccaaggatatgttggcactcgcataagcaagagattcta
tttgttggaattgggaactgtgtcttaagaatagatacaactaaagtgggtagaggaaaa
gacttcactgttgaagaccctgttaaatgtcatcttgaaaagcttgttgatggtgttcgc
ttagttggtaagcacgatggtgatgtgactgatttgtccatatctcaatggatgagcacc
cgcctggcctctggatccaaggatggctcggttaagatctgggatgatcgtaaacaagtg
ccattatccatttttaagccccatgatggtcaagctgtttattcagttgcttttcttaca
gcacctgaacgaccaaatcatataaatctaattacagcgggtcttctgaatcgagaagtt
aaaatttgggcttctactaatgaggatggctggttgttgccaagtgattctgagacttgg
aagtgtactcagacgttggaacttgttagttctctggaacctagagtcgaagaggcattt
ttcaaccaggttgcggtgctgccccaagcgagcctgattttgcttgcaaatgctaaaaag
aacgctatttatgccgtgcatgttgagtatggcccagatcctgcttctactcgcttagac
tacatagcagatttcacagttgcaatgcctatattaagccttacaggaacacatgatagc
caacctgatagtgaacaagttgttcaagtctattgtgttcaaactatggccattcagcaa
tatggtctagagctaccactctgtttgcctcctacagctgatagtactgggtttggaaga
gatcctgctatttctcgtgtttacgaggcacctctggaaatggcaggaacagagtcatct
acaggaactagtttcacagattcttactctgtcagttctttgagtaaaccatcaactgtt
gaccagtctgcagagcttgatctgaaaccatcagctccaccgcttgcatactcagaaggt
gatggttccgtgcctcttccatctgcacctcctgcaccgaagatggaggctcctggatca
ggaccagcacctggaggtcgtggtatagatcaatcagcttttgactatacaacaaacaga
aatgtggagcgtgatgttttgaaaagacaagatacacccatgcccattagaaaggatatc
ttaggtaaagatgagccaagagatggtcacagtgatgttccaatgcttcccaatccccgt
ttgatgtttcaggttggagggaatgctacgcatttggttactccatctgaaattatatcg
ggcactctctcgtcttctgaaaacaatgatgcttccaaatctgatggaggaaaaagtcaa
gatgtttccagcagaagctctcaggttccagaagtggaaccaaagcatattgatgagagt
aaacaagatcaaaatttgggactcgaagctgtcaaagaaactcagattgtctgtgagaat
atggagaaaactcggagttccttggaccaaactgttgaaatgatcagtgagcgctcagtt
acaactgataagtacagcgtggaagaatcacagtcatcatctgatcgaccgacatcagac
cagactggtatcagtgaaaatgttctgaagaagtttgtggaaatgcctgagaaaattgat
tattcctctgcttctagggagcaatcatcttcatttacgaaagaggagaaagttttgcat
cctcaaacatctggtcaaccgtcacctcctgtgagtgctttcaattcaactgagtcacat
gagcctttgagctccacatacctaccaatcacagtcagctcctacccagaagttggtgcc
acacaagggatgctgcaacagctcatggggaggcaggaggacatggaaaagcagctgagt
actgtggttcctgcatccatcgcaaaggagggcaaaagacttgagacatcattagggcgc
actgtagagaaatcgatcaaagctaatattgatgcattttgggctcgtctccaggaggaa
aacactaagcgtgaaaaggctgatagagatcgaatgcagcaatttgttactctcattaca
agctcaataaataaggacttaccttctaatctggagaagtcacttaagaaagaaatttct
tcacttgggcctgttgttgctcgtgcaattacgcctattattgagaagtgtctaacctct
gctgtttctgattcagttcagaaagggttgggtgacaagttgttcaatcagctggaaaag
tctattactggaaaacttgaagctacacttgccaggcaaatccaaatccagttccataca
tctggaaaacaggctcttcaggatgctttacgtactagctttgaatcattgcttgttcca
gcgtttgagcaagcatgcaagacaatgtttgagcaaatagatggtgcatttcaaaaggga
atgtctgagcactccaccgctattcagcatcaagtcgagtcttcacatagtccgttagcg
ctaactctaaaagaaatcatcaattctgcatcatccatcacccagagtttttcatcggag
ttacttgatggcaatcgcaagctactggcacttgttacttctgggaatgccatggcacat
aataccagtgctttgcagcccattaatggtcctatgggtggatcccaggaggttgaggct
ccgttagatcctatgaaagagctgggcagactgatatctgaacgcaagtttgacgaagca
tttacaatggctcttcaaaggagtgatgtttccatagtatcgtggctatgctcccaggtt
gatttgcgggcattatgtgcaatggtcccagtacctcttaaccagggggtcctcctggcc
ttattgcagcagctagcaattgacattcacaatgagacatcacgaaaggttcaatggatg
acagatgttgccatggcaatcaacccagcagaccagatgatcgcggttcatgtgcggcct
atctttgagcaagtctacaaccaactggcccaccagcggacactccctaccatgaccgca
gcagatggcaccagcatccgtgtgatcatgcatgtaattaactcagttctgcttagctac
aagtga
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integrated database retrieval system
