Zea mays (maize): 103627701
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Entry
103627701 CDS
T01088
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103627701
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103627701
Spliceosome [BR:
zma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103627701
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
Ski2_cyano_M
Motif
Other DBs
NCBI-GeneID:
103627701
NCBI-ProteinID:
XP_008646222
UniProt:
A0A8J8YKY8
A0A1D6HJR7
LinkDB
All DBs
Position
5:213930364..213939524
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AA seq
1175 aa
AA seq
DB search
MHCIAPRLLLLPLPTVSRHALSPTQTPPLPPLLPSRACKFHLASARSPSRAAASVSGDDE
DEEVDVDDDEDDETTIRNVDDEYDDDFEDGDEGDEGDEEAVDEESGGEYEEEAGEDEDKR
EDTAARRRDSEEYKSRRVAKLVAEVREFGEDVIDYNELAGIYDFPIDKFQRLAIQAFLRG
SSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLL
TGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVW
EETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYSLQ
PLLDGKGKKMNRKLRMSNSQNLASPKSEFYYVKGKRRFRTNKIEQGNSRPLDISKQVQLS
KHELSNMRRSQVPLIRDTLSQLWENGMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASE
VELELRRFKMQYPDAIRESAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATET
LAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTPYEG
PEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHKQKESDDVKDKHSGRTLEEARKL
VEQSFGNYVGSNVMVAAKEETERIRQEIQYLSSEITDESIDRKCREELSEEDYAEISLLQ
KRLKEEKQIRNELKKKMELERMAAWKNRLEEFESGHLPFMCLQYKDKDSIQHTIPAVFIG
NLNSFADQKIMNMVEDDSLVSGKPKRDSGEQLYRPSYYVALSSDNSWYLFTEKWIKTVYK
TGLPAVPSVEGGTLPRETLKQLLLREELVWDKVEKSEYGSLLSMEGSLDTWSWSLNVPVL
NSLSEDNEVERFSQEHQDAVECYKQQRRKVSHLKKTIKATRGFKEFQKIIDMRNFTKEKI
ERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRGENE
LWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVISYLEEQ
RNSLIDLQERHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRSIDL
LAQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcatcgccccccgcctgctcctcctcccgctcccgaccgtctcccgccacgcg
ctatcgccaacccagacgccacctcttcctcccctcctcccctcccgcgcctgtaagttc
cacctcgcctcggcgcgctcgccgtcccgcgccgccgcttcggtttccggcgacgacgag
gatgaggaggttgacgtggatgacgacgaggacgacgagacaaccatccgcaacgtagac
gatgaatacgacgacgatttcgaggacggggatgagggagatgagggcgatgaggaggcg
gtggacgaggagagcggtggtgagtacgaggaagaggcgggggaggacgaggacaagcgg
gaggataccgcagcgcggaggcgggactcggaggagtataagtcgcggcgggtggcgaag
ctggtcgccgaggtgcgggagttcggggaggacgtcatcgactacaacgagctcgccggg
atctacgacttccccatcgacaagtttcagcgcttggctatacaagcatttttaagaggt
tcatctgttgtagtttctgcacctacaagtagtgggaaaacattaatagcagaagctgca
gcagttgcaacagtagcaagaggaaggcgtctcttctacacaacaccattaaaggcattg
tcaaaccagaagttccgtgatttccggaataccttcggtgatcataatgttggccttctt
acaggagattctgctatcaacaaagatgctcagatcctaatcatgacaacagagatttta
cgtaacatgctgtaccaaagtgttggcatgacagcctctgaaggtagattatttcaagtt
gatgtcattgttttggatgaagtccattatttgagtgatatctcacgtggcactgtttgg
gaagaaactgtcatatattgtccaaaggaagtccaacttatatgtctgtcagccactgtt
gcaaatcctgatgaattagctggctggataagtcagattcatggtaaaacagagcttgta
acatcgaacaaacgtccagttccgcttacttggcacttctcgaagaaatattcattacaa
ccgcttcttgatggaaaggggaaaaaaatgaataggaaactgcggatgtctaactcccaa
aacttagcatctccaaagagtgagttctattatgtgaaagggaagaggaggtttagaaca
aataaaattgagcaaggtaatagcaggcctttggacatatcgaaacaggttcagttatca
aagcatgaactcagcaatatgcgtcgttcccaagttccactaatacgtgacactttatca
caactatgggaaaatggcatgcttccagctatctggtttatttttagtagaagagggtgt
gatgcagctgttgagtaccttgaggattgcagactgttgcatgactgtgaggctagtgaa
gttgagctggaacttaggaggttcaagatgcaatatcctgatgctattcgagaaagtgct
gtgaaaggactcatgcgaggagttgcggcccatcatgctggttgcttgccactgtggaaa
tcatttattgaagaattatttcaacgtggccttgttaaagtagtttttgcgacagaaacc
cttgcagctgggattaatatgcctgccaggacggctgtaatttcttctctcagtaaaaga
atagatgctgggcgccagctcttaaccccgaatgaactattccagatggcaggtcgtgct
ggaaggagagggattgatacagttgggcatgctgttcttgttcagactccatatgaaggg
cctgaagagtgttgtgacatcatctttgccggacttgagccacttgtctcacaattcact
gcatcatatgggatggttttgaatcttcttgccggttcaaaagttacacataaacagaaa
gaatcggatgatgttaaggacaagcattctggaagaaccttagaagaagctcgaaagcta
gtggagcaaagctttgggaattatgttggtagcaatgtaatggttgctgccaaagaagag
actgaaagaataaggcaagaaatacaatacctctcttcagaaattactgatgaatctatt
gatcgaaaatgcagggaagaattatcagaagaagactatgctgagatttccctcctacag
aagagactaaaggaagagaagcagatcagaaatgagctgaaaaaaaagatggaactggag
agaatggctgcatggaaaaatcggttagaggaatttgaaagtggccatcttcctttcatg
tgcctgcaatacaaagataaggattcaattcagcacacgatccctgctgtatttattgga
aacctcaactcatttgctgatcaaaagatcatgaacatggtggaagatgattcacttgtt
tctggcaagccgaaacgtgatagtggggaacaactttatcgcccatcttactatgtagct
ttaagttcagataattcatggtatctgttcacagaaaaatggattaaaactgtttacaag
acaggtctacctgctgtcccttctgttgaagggggcacactccctagagaaaccctgaaa
cagctcctcctgcgtgaagagttggtgtgggataaagttgaaaaatcagaatacggctct
ttgttaagcatggaaggttctttagacacatggtcgtggagtctcaatgttcctgtgctt
aatagcctttcggaagacaatgaggtagaacgattctcccaggaacatcaagatgctgta
gaatgctacaagcaacagaggaggaaggtttcacatttaaagaaaacaataaaggctact
aggggtttcaaagaattccaaaagatcatcgacatgagaaattttacaaaagagaagatt
gagcgcttagaagctagatcccgtcgcttgactcgacgaataagacaaattgaaccgacc
ggttggaaagaatttctccagattagcaaagtcatacaagaggctagagcattggatatc
aatactcaggtaatctatcctttgggtgagacggcagcggctatacgaggggaaaatgag
ctatggcttgctatggttcttaggaacaaggtcctcttggatctaaagccatctcaactg
gcagcagtttgtggaagtttagtttccgaagggatcaaacttcgtccttggaaaaatagc
agctatgtatatgaaccttcttctgttgttactggtgttataagttatttagaagagcag
agaaattcgctaatcgatctccaagagagacatagtgttaagataccttgcgaaatagat
gcccagtttgctgggatggttgaagcctgggcttcaggactgacttggagggagataatg
atggactctgcaatggacgatggagatttagcccgtctactcaggcgctctatagattta
ctagctcagattcccaaactgccagacattgatccggttctccaaaagaatgcacaaatt
gcttgcagcgtcatggaccgagtaccgattagtgagcttgccggttga
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integrated database retrieval system
