Zea mays (maize): 103627825
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Entry
103627825 CDS
T01088
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zma03009
]
103627825
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
90S particles
Other 90S particles
103627825
Pre-60S particles
Other pre-60S particles
103627825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
DUF7673
INTS1_R4
TPR_20
Invas_SpaK
Motif
Other DBs
NCBI-GeneID:
103627825
NCBI-ProteinID:
XP_020394308
LinkDB
All DBs
Position
5:220613993..220622021
Genome browser
AA seq
1274 aa
AA seq
DB search
MADVDMADLPQTPRSTAGDDDLSLLDGEGDLAAAILARLGGSPREDFQHLCATAAAMAQA
VSDQGVPATPVAYFAAAAAALAPLARAGDAGADRHVAGALLAFLSAALPALPAAVVRARG
REVADDVMRVLDFPSTPDSGVRAGLRCLAHLISAGDRANWEAVEPLYTVILRLSTDHRLK
VRKQSHSCLHDVLLSFQRQTILIPASEAITRSFERFLLLAGGSSAVNTGVSEEGPKGAKE
VLYILNALICCLPLMASKPSNTILKYFKPLLDLHQPILIRSLLDILHAVCESPTVQLKSD
VLLDLLCSLGLSVSSERKSGDEMASIARLLHVGTKKIYKQNRDICVVKLPLIFTSLGDIL
SSEFEEARFSSLEGFKGLIDNCIDETLVSQGIAQMKARHQGLKSDPTIIDKICAILEGLL
DVRYSDVWDRSFHVISVAFDKLGEFSADLLPEAVRNLADMQNLSDDDFSFRKQLDACLGS
AVAAMGPKNILEILQIQSISDENEWILPILEKHIVGASLQFFLRDILSMVGAIEKNIPKL
LKHDKLFSAKRAEGYVYSLWSLLPSCCNYPCDTSSNFRVLQDILCDTLQNHPALHGIVCS
SIQVLIKQNKKALSVSREEDILAEDEISKSERRAKERYTQNLAEENLKAIRAFSSKLLEV
LCSIFLMSSNDAIGLLQPAISEIASISDKNVVGKFFLDAIRKLLDATKAVNAEPVDDSSM
EIEADSNKNSMKRALLLDFAASLMPGLAAKSINVLFSYVKPAIKDSDSLIQKRAYKVLSM
LLKDAEFIEKNLDVLSELMISSLPCQFPSKRYRLECLYHLIVYILKDSSMVRKREIISSF
ITEILLALKEANKKTRNRAYDLLIEIARACENAGNDEGKEGLHQFFGMVAGGLAAGQTPY
AISAVVTGLARLTYEFSELIGVAYNLLPQTFLLMQRNNREIVKANLGFVKALVAKSKADI
LHEHLTGVVEGLLSWQSDTKNSFKAKVKSLIEILVKKCGLDAVKAVMPEEHMKLLTNIRK
INERKMRKAKSSEDGDAMSMASGATRQSRWNHTQMFSDFGSDDESDGPFSTQHTATSRSR
TESKASTRLSRRRQGDKKLLDKFIDHSTGDPLDLLDQKTVRLALKSAAGKKRAAPDDDDD
KFEVDPEGRIIVREEREKWKKKPAPRDDEEADGKSSVRSQSIKKRKTSGSGWAYTGHEYT
SKKASGDLKKKDKMEPYAYWPLDRKLLNRRSDRKASARKGMSSVMKITKKLEGKSASAAL
SAKRSGKTKHKKNK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcgacatggctgacctcccacagaccccgcgatccaccgccggcgacgac
gacctctccttgctggacggagagggcgacctcgccgccgccatcctcgcgcgcctcggc
ggctcgccgcgggaggactttcagcacctctgtgccaccgccgccgccatggcgcaggcc
gttagcgaccaaggagtgcccgccaccccagtagcctacttcgcagcggctgctgcggcg
cttgccccgctcgctcgcgcgggggacgccggcgccgaccgccacgtcgccggagcgctc
ctcgccttcctctccgcggcgctgccggccctcccggccgcagtggtgcgcgcccgtggc
cgtgaggtcgccgatgacgtgatgcgcgtgctcgatttcccttccacgcctgattcaggc
gtcagggcggggctgagatgcctcgcgcatttgatatctgcgggggacagggcgaactgg
gaggcggtagagcctttatacactgtgattctgcgcctcagtaccgatcaccggctaaag
gtgcggaaacaatctcattcatgcttgcatgatgttctcctgagttttcaaaggcaaaca
attttgattccagcaagtgaagcaataacaagatcttttgagcggtttctgctgcttgct
ggaggatctagtgctgtaaatacaggtgtatcagaggaaggccccaagggggctaaggag
gtcctgtatattttgaatgctttgatatgctgccttccccttatggcctccaaaccttcc
aatactatcttgaaatattttaaaccactattagatttgcatcaaccaattttgataagg
agtcttctggacattctgcatgctgtttgtgagagtccaaccgtacagctcaaatctgat
gtgttattggaccttctgtgctcgttgggtctgtcagtgtcttcagaaaggaaatcagga
gatgaaatggcttcaattgcacgacttctacatgttggcactaaaaaaatttacaagcaa
aacagggacatttgtgttgtaaaacttccattgatatttacctcacttggagatatatta
tcaagtgaattcgaagaggcgagattttcatctctggagggttttaaaggtttaatagat
aactgcattgatgaaaccttggtgtcacagggtattgctcagatgaaggctagacatcaa
gggttgaaatcagatccaacaatcatagataagatatgtgctatcctagaaggcttgcta
gatgtccgctacagtgacgtctgggacagatcatttcatgtaatttcagtggcatttgac
aaactaggagagttttcagctgatctattgcccgaagcagtcaggaacttggcagacatg
caaaacttgtcagatgatgacttttcctttcggaagcagcttgatgcatgtcttggttca
gcggttgctgcaatggggccaaagaatattctggaaattcttcagattcagtcaataagt
gatgaaaatgaatggattctccctattctggagaagcacattgttggtgccagtttacaa
tttttcttaagagatattctgagtatggttggagccatagagaaaaacattcctaagctt
ttgaagcatgacaagcttttctctgccaagagagctgaaggttatgtgtattctctgtgg
tctttgttaccatcttgttgcaactacccatgtgatacgtcaagcaattttagagtttta
caagatattttatgtgacactctgcaaaaccatcctgccttgcatggcattgtttgctcc
agtattcaggttttaatcaaacaaaacaaaaaagctctgtcagtttctagggaagaagac
attcttgctgaggatgaaataagcaaatctgaaagaagagcaaaggaacgttatactcaa
aatctggctgaggaaaacttgaaagcgatacgtgctttctcttctaagcttttggaagta
ctttgttctatattcttgatgtcttcgaatgatgctattggattattgcagcctgcgata
agtgagatagcttccatatcagacaaaaacgttgttgggaaattcttccttgatgcaata
agaaagttgttggatgctacaaaggctgttaatgcagagcctgtggatgatagttcaatg
gaaattgaagccgattccaacaaaaatagcatgaagagggctctacttttggattttgca
gcttcattgatgcctggtttagctgcaaagtctatcaatgtgttgttcagttatgtgaaa
cctgcaattaaggacagcgactctttgattcaaaagagagcgtacaaggtcctgtcaatg
ctgctcaaggatgctgaatttattgaaaagaatctggatgtcctgtcagaattgatgatt
tcgtcactaccatgccaatttccctcgaaacgttacagactcgaatgcctataccacctt
attgtttacattttgaaggattcatctatggttagaaagagagaaattattagttcattc
atcactgaaatacttcttgcattgaaggaggccaacaagaaaaccagaaacagagcttat
gatttgcttattgaaattgcccgtgcctgtgaaaatgctggaaatgacgaggggaaggag
ggcttgcaccagttctttggcatggttgctggtggtctggccgctggtcaaacgccatat
gcaattagtgctgttgtaactgggttggctcggttgacttatgaattctcagagcttatc
ggagtcgcatacaatctccttcctcagactttcttgcttatgcaaaggaacaaccgggaa
atagtcaaagcgaacttaggttttgtcaaagctttagttgctaaatctaaagctgacata
ttgcatgaacacttgactggagttgttgagggcctgctgagctggcaaagtgatacaaag
aattcctttaaagctaaggtcaagtcactcatagaaattcttgtgaagaaatgtggttta
gacgctgtgaaggctgtgatgcctgaggagcatatgaaattgctcacgaatattaggaag
attaatgagcgaaaaatgcgaaaggcaaaatcttctgaggatggggatgccatgtctatg
gcctcaggagctacaaggcaaagtaggtggaatcacacacaaatgttttcggactttgga
agtgatgatgaatcagatggtcctttttctacccaacatactgctacttctcgatctcgt
actgaatcaaaagcttcaactcggttgagtcggaggcgccaaggagataagaaactacta
gacaagttcattgaccattcaactggcgaccccctagatttacttgaccagaaaacggtg
cggttggctctcaaatcagcagcagggaaaaagagggctgcacccgatgacgacgacgat
aagttcgaggtggaccctgaaggccgtataatcgtgcgcgaagagcgggagaagtggaaa
aagaagccggcccctcgtgacgacgaggaggctgatggaaagagctctgtcagaagccag
tccatcaagaagaggaagacatccggctctggctgggcctacactggtcatgagtacacc
agcaagaaagccagtggtgatctgaagaagaaagacaagatggaaccttacgcgtactgg
ccgctggaccgtaagcttctcaaccgcaggtcggaccgcaaggcgtctgcgcgcaagggt
atgtccagtgtcatgaagatcaccaagaagctcgaagggaagagtgcaagcgccgcgctt
tctgctaaacggtcgggaaaaacgaagcacaaaaagaacaaataa
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